Universal metabolite: skm

Descriptive name:

Shikimate

Formulae in BiGG models:

C7H9O5

Charges in BiGG models:

-1

skm in BiGG models:

Organism
Model
Compartmentalized BiGG ID
Escherichia coli str. K-12 substr. MG1655
iJO1366
skm_c
Escherichia coli str. K-12 substr. MG1655
iAF1260
skm_c
Saccharomyces cerevisiae S288C
iMM904
skm_c
Staphylococcus aureus subsp. aureus N315
iSB619
skm_c
Escherichia coli APEC O1
iAPECO1_1312
skm_c
Saccharomyces cerevisiae S288C
iND750
skm_c
Yersinia pestis CO92
iPC815
skm_c
Shigella flexneri 2a str. 301
iSF_1195
skm_c
Pseudomonas putida KT2440
iJN746
skm_c
Helicobacter pylori 26695
iIT341
skm_c
Mycobacterium tuberculosis H37Rv
iNJ661
skm_c
Escherichia coli BW2952
iBWG_1329
skm_c
Escherichia coli BL21(DE3)
iB21_1397
skm_c
Escherichia coli CFT073
ic_1306
skm_c
Escherichia coli O127:H6 str. E2348/69
iE2348C_1286
skm_c
Escherichia coli 042
iEC042_1314
skm_c
Escherichia coli 55989
iEC55989_1330
skm_c
Escherichia coli ABU 83972
iECABU_c1320
skm_c
Escherichia coli B str. REL606
iECB_1328
skm_c
Escherichia coli 'BL21-Gold(DE3)pLysS AG'
iECBD_1354
skm_c
Escherichia coli BL21(DE3)
iECD_1391
skm_c
Escherichia coli DH1
iEcDH1_1363
skm_c
Escherichia coli DH1
iECDH1ME8569_1439
skm_c
Escherichia coli str. K-12 substr. DH10B
iECDH10B_1368
skm_c
Escherichia coli O139:H28 str. E24377A
iEcE24377_1341
skm_c
Escherichia coli ED1a
iECED1_1282
skm_c
Escherichia coli O157:H7 str. EC4115
iECH74115_1262
skm_c
Escherichia coli HS
iEcHS_1320
skm_c
Escherichia coli IAI1
iECIAI1_1343
skm_c
Escherichia coli IAI39
iECIAI39_1322
skm_c
Escherichia coli NA114
iECNA114_1301
skm_c
Escherichia coli O103:H2 str. 12009
iECO103_1326
skm_c
Escherichia coli O111:H- str. 11128
iECO111_1330
skm_c
Escherichia coli O26:H11 str. 11368
iECO26_1355
skm_c
Escherichia coli IHE3034
iECOK1_1307
skm_c
Escherichia coli ATCC 8739
iEcolC_1368
skm_c
Escherichia coli 536
iECP_1309
skm_c
Escherichia coli S88
iECS88_1305
skm_c
Escherichia coli O157:H7 str. Sakai
iECs_1301
skm_c
Escherichia coli SE11
iECSE_1348
skm_c
Escherichia coli SE15
iECSF_1327
skm_c
Escherichia coli SMS-3-5
iEcSMS35_1347
skm_c
Escherichia coli O157:H7 str. TW14359
iECSP_1301
skm_c
Escherichia coli UMN026
iECUMN_1333
skm_c
Escherichia coli W
iECW_1372
skm_c
Escherichia coli KO11FL
iEKO11_1354
skm_c
Escherichia coli ETEC H10407
iETEC_1333
skm_c
Escherichia coli O55:H7 str. CB9615
iG2583_1286
skm_c
Escherichia coli LF82
iLF82_1304
skm_c
Escherichia coli O83:H1 str. NRG 857C
iNRG857_1313
skm_c
Shigella flexneri 2a str. 2457T
iS_1188
skm_c
Shigella boydii CDC 3083-94
iSbBS512_1146
skm_c
Shigella boydii Sb227
iSBO_1134
skm_c
Shigella dysenteriae Sd197
iSDY_1059
skm_c
Shigella flexneri 5 str. 8401
iSFV_1184
skm_c
Shigella flexneri 2002017
iSFxv_1172
skm_c
Shigella sonnei Ss046
iSSON_1240
skm_c
Escherichia coli UM146
iUMN146_1321
skm_c
Escherichia coli UMNK88
iUMNK88_1353
skm_c
Escherichia coli UTI89
iUTI89_1310
skm_c
Escherichia coli W
iWFL_1372
skm_c
Escherichia coli O157:H7 str. EDL933
iZ_1308
skm_c
Escherichia coli str. K-12 substr. MG1655
iJR904
skm_c
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
iYL1228
skm_c
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
STM_v1_0
skm_c
Geobacter metallireducens GS-15
iAF987
skm_c
Synechocystis sp. PCC 6803
iJN678
skm_c
Methanosarcina barkeri str. Fusaro
iAF692
skm_c
Thermotoga maritima MSB8
iLJ478
skm_c
Clostridium ljungdahlii DSM 13528
iHN637
skm_c
Escherichia coli str. K-12 substr. W3110
iY75_1357
skm_c
Bacillus subtilis subsp. subtilis str. 168
iYO844
skm_c
Escherichia coli str. K-12 substr. MG1655
iAF1260b
skm_c
Lactococcus lactis subsp. cremoris MG1363
iNF517
skm_c
Escherichia coli str. K-12 substr. MG1655
iML1515
skm_c
Synechococcus elongatus PCC 7942
iJB785
skm_c
Mycobacterium tuberculosis H37Rv
iEK1008
skm_c
Staphylococcus aureus subsp. aureus USA300_TCH1516
iYS854
skm_c
Escherichia coli BL21(DE3)
iEC1356_Bl21DE3
skm_c
Escherichia coli ATCC 8739
iEC1349_Crooks
skm_c
Escherichia coli W
iEC1364_W
skm_c
Escherichia coli str. K-12 substr. W3110
iEC1372_W3110
skm_c
Acinetobacter baumannii AYE
iCN718
skm_c
Escherichia coli DH5[alpha]
iEC1368_DH5a
skm_c
Escherichia coli C
iEC1344_C
skm_c
Synechocystis sp. PCC 6803
iSynCJ816
skm_c
Plasmodium falciparum 3D7
iAM_Pf480
skm_c
Plasmodium vivax Sal-1
iAM_Pv461
skm_c
Plasmodium berghei
iAM_Pb448
skm_c
Plasmodium cynomolgi strain B
iAM_Pc455
skm_c
Plasmodium knowlesi strain H
iAM_Pk459
skm_c
Clostridioides difficile 630
iCN900
skm_c
Pseudomonas putida KT2440
iJN1463
skm_c
Salmonella pan-reactome
iYS1720
skm_c
Escherichia coli str. K-12 substr. MG1655
iJO1366
skm_e
Escherichia coli str. K-12 substr. MG1655
iAF1260
skm_e
Escherichia coli APEC O1
iAPECO1_1312
skm_e
Yersinia pestis CO92
iPC815
skm_e
Shigella flexneri 2a str. 301
iSF_1195
skm_e
Mycobacterium tuberculosis H37Rv
iNJ661
skm_e
Escherichia coli BW2952
iBWG_1329
skm_e
Escherichia coli BL21(DE3)
iB21_1397
skm_e
Escherichia coli CFT073
ic_1306
skm_e
Escherichia coli O127:H6 str. E2348/69
iE2348C_1286
skm_e
Escherichia coli 042
iEC042_1314
skm_e
Escherichia coli 55989
iEC55989_1330
skm_e
Escherichia coli ABU 83972
iECABU_c1320
skm_e
Escherichia coli B str. REL606
iECB_1328
skm_e
Escherichia coli 'BL21-Gold(DE3)pLysS AG'
iECBD_1354
skm_e
Escherichia coli BL21(DE3)
iECD_1391
skm_e
Escherichia coli DH1
iEcDH1_1363
skm_e
Escherichia coli DH1
iECDH1ME8569_1439
skm_e
Escherichia coli str. K-12 substr. DH10B
iECDH10B_1368
skm_e
Escherichia coli O139:H28 str. E24377A
iEcE24377_1341
skm_e
Escherichia coli ED1a
iECED1_1282
skm_e
Escherichia coli O157:H7 str. EC4115
iECH74115_1262
skm_e
Escherichia coli HS
iEcHS_1320
skm_e
Escherichia coli IAI1
iECIAI1_1343
skm_e
Escherichia coli IAI39
iECIAI39_1322
skm_e
Escherichia coli NA114
iECNA114_1301
skm_e
Escherichia coli O103:H2 str. 12009
iECO103_1326
skm_e
Escherichia coli O111:H- str. 11128
iECO111_1330
skm_e
Escherichia coli O26:H11 str. 11368
iECO26_1355
skm_e
Escherichia coli IHE3034
iECOK1_1307
skm_e
Escherichia coli ATCC 8739
iEcolC_1368
skm_e
Escherichia coli 536
iECP_1309
skm_e
Escherichia coli S88
iECS88_1305
skm_e
Escherichia coli O157:H7 str. Sakai
iECs_1301
skm_e
Escherichia coli SE11
iECSE_1348
skm_e
Escherichia coli SE15
iECSF_1327
skm_e
Escherichia coli SMS-3-5
iEcSMS35_1347
skm_e
Escherichia coli O157:H7 str. TW14359
iECSP_1301
skm_e
Escherichia coli UMN026
iECUMN_1333
skm_e
Escherichia coli W
iECW_1372
skm_e
Escherichia coli KO11FL
iEKO11_1354
skm_e
Escherichia coli ETEC H10407
iETEC_1333
skm_e
Escherichia coli O55:H7 str. CB9615
iG2583_1286
skm_e
Escherichia coli LF82
iLF82_1304
skm_e
Escherichia coli O83:H1 str. NRG 857C
iNRG857_1313
skm_e
Shigella flexneri 2a str. 2457T
iS_1188
skm_e
Shigella boydii CDC 3083-94
iSbBS512_1146
skm_e
Shigella boydii Sb227
iSBO_1134
skm_e
Shigella dysenteriae Sd197
iSDY_1059
skm_e
Shigella flexneri 5 str. 8401
iSFV_1184
skm_e
Shigella flexneri 2002017
iSFxv_1172
skm_e
Shigella sonnei Ss046
iSSON_1240
skm_e
Escherichia coli UM146
iUMN146_1321
skm_e
Escherichia coli UMNK88
iUMNK88_1353
skm_e
Escherichia coli UTI89
iUTI89_1310
skm_e
Escherichia coli W
iWFL_1372
skm_e
Escherichia coli O157:H7 str. EDL933
iZ_1308
skm_e
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
iYL1228
skm_e
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
STM_v1_0
skm_e
Escherichia coli str. K-12 substr. W3110
iY75_1357
skm_e
Escherichia coli str. K-12 substr. MG1655
iAF1260b
skm_e
Escherichia coli str. K-12 substr. MG1655
iML1515
skm_e
Mycobacterium tuberculosis H37Rv
iEK1008
skm_e
Escherichia coli BL21(DE3)
iEC1356_Bl21DE3
skm_e
Escherichia coli ATCC 8739
iEC1349_Crooks
skm_e
Escherichia coli W
iEC1364_W
skm_e
Escherichia coli str. K-12 substr. W3110
iEC1372_W3110
skm_e
Escherichia coli DH5[alpha]
iEC1368_DH5a
skm_e
Escherichia coli C
iEC1344_C
skm_e
Pseudomonas putida KT2440
iJN1463
skm_e
Salmonella pan-reactome
iYS1720
skm_e
Escherichia coli str. K-12 substr. MG1655
iJO1366
skm_p
Escherichia coli str. K-12 substr. MG1655
iAF1260
skm_p
Escherichia coli APEC O1
iAPECO1_1312
skm_p
Yersinia pestis CO92
iPC815
skm_p
Shigella flexneri 2a str. 301
iSF_1195
skm_p
Escherichia coli BW2952
iBWG_1329
skm_p
Escherichia coli BL21(DE3)
iB21_1397
skm_p
Escherichia coli CFT073
ic_1306
skm_p
Escherichia coli O127:H6 str. E2348/69
iE2348C_1286
skm_p
Escherichia coli 042
iEC042_1314
skm_p
Escherichia coli 55989
iEC55989_1330
skm_p
Escherichia coli ABU 83972
iECABU_c1320
skm_p
Escherichia coli B str. REL606
iECB_1328
skm_p
Escherichia coli 'BL21-Gold(DE3)pLysS AG'
iECBD_1354
skm_p
Escherichia coli BL21(DE3)
iECD_1391
skm_p
Escherichia coli DH1
iEcDH1_1363
skm_p
Escherichia coli DH1
iECDH1ME8569_1439
skm_p
Escherichia coli str. K-12 substr. DH10B
iECDH10B_1368
skm_p
Escherichia coli O139:H28 str. E24377A
iEcE24377_1341
skm_p
Escherichia coli ED1a
iECED1_1282
skm_p
Escherichia coli O157:H7 str. EC4115
iECH74115_1262
skm_p
Escherichia coli HS
iEcHS_1320
skm_p
Escherichia coli IAI1
iECIAI1_1343
skm_p
Escherichia coli IAI39
iECIAI39_1322
skm_p
Escherichia coli NA114
iECNA114_1301
skm_p
Escherichia coli O103:H2 str. 12009
iECO103_1326
skm_p
Escherichia coli O111:H- str. 11128
iECO111_1330
skm_p
Escherichia coli O26:H11 str. 11368
iECO26_1355
skm_p
Escherichia coli IHE3034
iECOK1_1307
skm_p
Escherichia coli ATCC 8739
iEcolC_1368
skm_p
Escherichia coli 536
iECP_1309
skm_p
Escherichia coli S88
iECS88_1305
skm_p
Escherichia coli O157:H7 str. Sakai
iECs_1301
skm_p
Escherichia coli SE11
iECSE_1348
skm_p
Escherichia coli SE15
iECSF_1327
skm_p
Escherichia coli SMS-3-5
iEcSMS35_1347
skm_p
Escherichia coli O157:H7 str. TW14359
iECSP_1301
skm_p
Escherichia coli UMN026
iECUMN_1333
skm_p
Escherichia coli W
iECW_1372
skm_p
Escherichia coli KO11FL
iEKO11_1354
skm_p
Escherichia coli ETEC H10407
iETEC_1333
skm_p
Escherichia coli O55:H7 str. CB9615
iG2583_1286
skm_p
Escherichia coli LF82
iLF82_1304
skm_p
Escherichia coli O83:H1 str. NRG 857C
iNRG857_1313
skm_p
Shigella flexneri 2a str. 2457T
iS_1188
skm_p
Shigella boydii CDC 3083-94
iSbBS512_1146
skm_p
Shigella boydii Sb227
iSBO_1134
skm_p
Shigella dysenteriae Sd197
iSDY_1059
skm_p
Shigella flexneri 5 str. 8401
iSFV_1184
skm_p
Shigella flexneri 2002017
iSFxv_1172
skm_p
Shigella sonnei Ss046
iSSON_1240
skm_p
Escherichia coli UM146
iUMN146_1321
skm_p
Escherichia coli UMNK88
iUMNK88_1353
skm_p
Escherichia coli UTI89
iUTI89_1310
skm_p
Escherichia coli W
iWFL_1372
skm_p
Escherichia coli O157:H7 str. EDL933
iZ_1308
skm_p
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
iYL1228
skm_p
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
STM_v1_0
skm_p
Escherichia coli str. K-12 substr. W3110
iY75_1357
skm_p
Escherichia coli str. K-12 substr. MG1655
iAF1260b
skm_p
Escherichia coli str. K-12 substr. MG1655
iML1515
skm_p
Escherichia coli BL21(DE3)
iEC1356_Bl21DE3
skm_p
Escherichia coli ATCC 8739
iEC1349_Crooks
skm_p
Escherichia coli W
iEC1364_W
skm_p
Escherichia coli str. K-12 substr. W3110
iEC1372_W3110
skm_p
Escherichia coli DH5[alpha]
iEC1368_DH5a
skm_p
Escherichia coli C
iEC1344_C
skm_p
Pseudomonas putida KT2440
iJN1463
skm_p
Salmonella pan-reactome
iYS1720
skm_p
Chlamydomonas reinhardtii
iRC1080
skm_h
Phaeodactylum tricornutum CCAP 1055/1
iLB1027_lipid
skm_h

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Old identifiers

    skm