2AGPEAT120

2-acyl-glycerophospho-ethanolamine acyltransferase (n-C12:0)

2AGPEAT140

2-acyl-glycerophospho-ethanolamine acyltransferase (n-C14:0)

2AGPEAT141

2-acyl-glycerophospho-ethanolamine acyltransferase (n-C14:1)

2AGPEAT160

2-acyl-glycerophospho-ethanolamine acyltransferase (n-C16:0)

2AGPEAT161

2-acyl-glycerophospho-ethanolamine acyltransferase (n-C16:1)

2AGPEAT180

2-acyl-glycerophospho-ethanolamine acyltransferase (n-C18:0)

2AGPEAT181

2-acyl-glycerophospho-ethanolamine acyltransferase (n-C18:1)

2AGPGAT120

2-acyl-glycerophospho-glycerol acyltransferase (n-C12:0)

2AGPGAT140

2-acyl-glycerophospho-glycerol acyltransferase (n-C14:0)

2AGPGAT141

2-acyl-glycerophospho-glycerol acyltransferase (n-C14:1)

2AGPGAT160

2-acyl-glycerophospho-glycerol acyltransferase (n-C16:0)

2AGPGAT161

2-acyl-glycerophospho-glycerol acyltransferase (n-C16:1)

2AGPGAT180

2-acyl-glycerophospho-glycerol acyltransferase (n-C18:0)

2AGPGAT181

2-acyl-glycerophospho-glycerol acyltransferase (n-C18:1)

3PEPTabcpp

Tripeptide (LalaDgluMdap) transport via ABC system (periplasm)

4PEPTabcpp

Tetrapeptide (LalaDgluMdapDala) transport via ABC system (periplasm)

AACPS1

Acyl-[acyl-carrier-protein] synthetase (n-C14:0)

AACPS2

Acyl-[acyl-carrier-protein] synthetase (n-C14:1)

AACPS3

Acyl-[acyl-carrier-protein] synthetase (n-C16:0)

AACPS4

Acyl-[acyl-carrier-protein] synthetase (n-C16:1)

AACPS5

Acyl-[acyl-carrier-protein] synthetase (n-C18:1)

AACPS6

Acyl-[acyl-carrier-protein] synthetase (n-C18:0)

AACPS7

Acyl-[acyl-carrier-protein] synthetase (n-C12:0)

AACPS8

Acyl-[acyl-carrier-protein] synthetase (n-C10:0)

AACPS9

Acyl-[acyl-carrier-protein] synthetase (n-C8:0)

ACCOAC

Acetyl-CoA carboxylase

ACGAMK

N-acetylglucosamine kinase

ACGK

Acetylglutamate kinase

ACITL

ATP-Citrate lyase

ACKr

Acetate kinase

ACS

Acetyl-CoA synthetase

ACS2

Acetyl-CoA synthase (propionate)

ADCPS1

Adenosylcobinamide-phosphate synthase

ADCPS2

Adenosylcobinamide-phosphate synthase

ADCYRS

Adenosylcobyric acid synthase (glutamine-hydrolysing)

ADK1

Adenylate kinase

ADNK1

Adenosine kinase

ADOCBIK

Adenosyl cobinamide kinase

ALAALAabcpp

D-alanyl-D-alanine (DalaDala) transport via ABC system (periplasm)

ALAALAr

D-alanine-D-alanine ligase (reversible)

ALATRS

Alanyl-tRNA synthetase

ANHMK

1,6-anhydrous-N-Acetylmuramate kinase

ARGSS

Argininosuccinate synthase

ARGTRS

Arginyl-tRNA synthetase

ASNS1

Asparagine synthase (glutamine-hydrolysing)

ASNTRS

Asparaginyl-tRNA synthetase

ASPK

Aspartate kinase

ASPTRS

Aspartyl-tRNA synthetase

ATPM

ATP maintenance requirement

ATPPRT

ATP phosphoribosyltransferase

ATPS10rpp

ATP synthase (10 protons for 3 ATP) (periplasm)

BACCL

Biotin acetyl CoA carboxylase ligase

BCOALIG

Benzoate CoA ligase

BCOALIG2

4-hydroxybenzoate--coenzyme A ligase

BIOMASS_Gm_GS15_core_79p20M

Geobacter metallireducens biomass objective function (iAF987) - core - with 79.20 GAM estimate

BIOMASS_Gm_GS15_WT_79p20M

Geobacter metallireducens biomass objective function (iAF987) - WT - with 79.20 GAM estimate

BUTKr

Butyrate kinase

BUTSO3abcpp

Butanesulfonate transport via ABC system (periplasm)

CA2abc1pp

Calcium transport via ABC system (periplasm)

CA2abcpp

Calcium transport via ABC system (periplasm)

CBIAT

Cobinamide adenyltransferase

CBLAT

Cob(I)alamin adenosyltransferase

CBMKr

Carbamate kinase

CBPS

Carbamoyl-phosphate synthase (glutamine-hydrolysing)

CCGS

7-cyano-7-carbaguanine synthase

CDPMEK

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase

Cobalt2abcppI

Cobalt II transport via ABC system periplasm I

CRO4abcpp

Chromate transport via ABC system (periplasm)

CTPS1

CTP synthase NH3

CTPS2

CTP synthase (glutamine)

CU2abcpp

Copper (Cu+2) ABC transporter (periplasm)

CUabcpp

Copper transport via ABC system (periplasm)

CYRDAAT

Cob(I)yrinic acid a,c-diamide adenosyltransferase

CYRDAS

Cob(II)yrinate a,c-diamide synthase (glutamine-hydrolysing)

CYSTRS

Cysteinyl-tRNA synthetase

CYTK1

Cytidylate kinase (CMP)

CYTK2

Cytidylate kinase (dCMP)

DADK

Deoxyadenylate kinase

DADNC

Diadenylate cyclase

DAGK120

Diacylglycerol kinase (n-C12:0)

DAGK140

Diacylglycerol kinase (n-C14:0)

DAGK141

Diacylglycerol kinase (n-C14:1)

DAGK160

Diacylglycerol kinase (n-C16:0)

DAGK161

Diacylglycerol kinase (n-C16:1)

DAGK180

Diacylglycerol kinase (n-C18:0)

DAGK181

Diacylglycerol kinase (n-C18:1)

DBTS

Dethiobiotin synthase

DGK1

Deoxyguanylate kinase (dGMP:ATP)

DHFS

Dihydrofolate synthase

DPCOAK

Dephospho-CoA kinase

DTMPK

DTMP kinase

ETHSO3abcpp

Ethanesulfonate transport via ABC system (periplasm)

FACOAL100t2pp

Fatty-acid-CoA ligase (decanoate transport via vectoral Co-A coupling)

FACOAL120t2pp

Fatty-acid-CoA ligase (dodecanoate transport via vectoral Co-A coupling)

FACOAL140t2pp

Fatty-acid-CoA ligase (tetradecanoate transport via vectoral Co-A coupling)

FACOAL141t2pp

Fatty-acid-CoA ligase (tetradecenoate transport via vectoral Co-A coupling)

FACOAL160t2pp

Fatty-acid-CoA ligase (hexadecanoate transport via vectoral Co-A coupling)

FACOAL161t2pp

Fatty-acid-CoA ligase (hexadecenoate transport via vectoral Co-A coupling)

FACOAL180t2pp

Fatty-acid-CoA ligase (octadecanoate transport via vectoral Co-A coupling)

FACOAL181t2pp

Fatty-acid-CoA ligase (octadecenoate transport via vectoral Co-A coupling)

FACOAL40It2pp

Fatty-acid--CoA ligase (isobutanoate transport via vectoral Co-A coupling)

FACOAL40t2pp

Fatty-acid--CoA ligase (butanoate transport via vectoral Co-A coupling)

FACOAL50It2pp

Fatty-acid--CoA ligase (isovalerate transport via vectoral Co-A coupling)

FACOAL50t2pp

Fatty-acid--CoA ligase (pentanoate / valerate transport via vectoral Co-A coupling)

FACOAL60t2pp

Fatty-acid-CoA ligase (hexanoate transport via vectoral Co-A coupling)

FACOAL80t2pp

Fatty-acid-CoA ligase (octanoate transport via vectoral Co-A coupling)

FMNAT

FMN adenylyltransferase

FTHFCL

5 formethyltetrahydrofolate cyclo ligase

GART

GAR transformylase-T

GDPDPK

GDP diphosphokinase

GK1

Guanylate kinase (GMP:ATP)

GLGC

Glucose-1-phosphate adenylyltransferase

GLNS

Glutamine synthetase

GLNTRS

Glutaminyl-tRNA synthetase

GLU5K

Glutamate 5-kinase

GLUTRS

Glutamyl-tRNA synthetase

GLYK

Glycerol kinase

GLYTRS

Glycyl-tRNA synthetase

GM1LIPAabcpp

Geobacter metallireucens modelified lipid A transport via ABC system (periplasm)

GM1LIPAabctex

G. metallireducens core lipid A transport via ABC system (periplasm to extracellular)

GM2LIPAabcpp

Geobacter metallireucens modelified lipid A transport via ABC system (periplasm)

GM2LIPAabctex

G. metallireducens core lipid A transport via ABC system (periplasm to extracellular)

GMHEPAT

D-glycero-D-manno-hepose 1-phosphate adenyltransferase

GMHEPK

D-glycero-D-manno-heptose 7-phosphate kinase

GMPS2

GMP synthase

GTPDPK

GTP diphosphokinase

HEX1

Hexokinase (D-glucose:ATP)

HEX4

Hexokinase (D-mannose:ATP)

HEX7

Hexokinase (D-fructose:ATP)

HISTRS

Histidyl-tRNA synthetase

HKtpp

H+/K+ gastric/non-gastric P-ATPase and ABC ATPase (periplasm)

HMPK1

Hydroxymethylpyrimidine kinase (ATP)

HPPK2

6-hydroxymethyl-dihydropterin pyrophosphokinase

ILEabcpp

L-isoleucine transport via ABC system (periplasm)

ILETRS

Isoleucyl-tRNA synthetase

ISETACabcpp

Isethionate transport via ABC system (periplasm)

K2L4Aabcpp

KDO(2)-lipid IV A transport via ABC system (periplasm)

K2L4Aabctex

KDO(2)-lipid IV A transport via ABC system (periplasm to extracellular)

LCYSTabcpp

L-cysteate transport via ABC system (periplasm)

LEUabcpp

L-leucine transport via ABC system (periplasm)

LEUTRS

Leucyl-tRNA synthetase

LIPAabcpp

Lipid A transport via ABC system (periplasm)

LIPAabctex

Lipid A transport via ABC system (periplasm to extracellular)

LYSTRS

Lysyl-tRNA synthetase

MCCC

Methylcrotonoyl-CoA carboxylase

METAT

Methionine adenosyltransferase

METTRS

Methionyl-tRNA synthetase

MG2uabcpp

Magnesium (Mg+2) ABC transporter (ubtake, periplasm)

MNabc_1

Manganese Mn2 transport via ABC system periplasm

MOBDabcpp

Molybdate transport via ABC system (periplasm)

MPTAT

Molybdopterin adenylyltransferase

MPTSS

Molybdopterin synthase sulfurylase

MSO3abcpp

Methanesulfonate transport via ABC system (periplasm)

NADK

NAD kinase

NADS1

NAD synthase (nh3)

NAMNPP

Nicotinic acid mononucleotide pyrophosphorylase

NDPK1

Nucleoside-diphosphate kinase (ATP:GDP)

NDPK2

Nucleoside-diphosphate kinase (ATP:UDP)

NDPK3

Nucleoside-diphosphate kinase (ATP:CDP)

NDPK4

Nucleoside-diphosphate kinase (ATP:dTDP)

NDPK5

Nucleoside-diphosphate kinase (ATP:dGDP)

NDPK6

Nucleoside-diphosphate kinase (ATP:dUDP)

NDPK7

Nucleoside-diphosphate kinase (ATP:dCDP)

NDPK8

Nucleoside-diphosphate kinase (ATP:dADP)

NI2uabcpp

Nickel transport via ABC system (uptake, periplasm)

NIT1b

Nitrogenase

NNATr

Nicotinate-nucleotide adenylyltransferase

NTPP6

Nucleoside triphosphate pyrophosphorylase (atp)

PA120abcpp

Phosphatidate transport via ABC system (n-C12:0, periplasm)

PA140abcpp

Phosphatidate transport via ABC system (n-C14:0, periplasm)

PA141abcpp

Phosphatidate transport via ABC system (n-C14:1, periplasm)

PA160abcpp

Phosphatidate transport via ABC system (n-C16:0, periplasm)

PA161abcpp

Phosphatidate transport via ABC system (n-C16:1, periplasm)

PA180abcpp

Phosphatidate transport via ABC system (n-C18:0, periplasm)

PA181abcpp

Phosphatidate transport via ABC system (n-C18:1, periplasm)

PACCOAL

Phenylacetate-CoA ligase

PACCOAL2

Phenylacetate-CoA ligase (hydroxyphenylacetate)

PACCOAL3

Phenylacetate-CoA ligase (indoleacetate)

PANTS

Pantothenate synthase

PC

Pyruvate carboxylase

PE120abcpp

Phosphatidylethanolamine transport via ABC system (n-C12:0, periplasm)

PE140abcpp

Phosphatidylethanolamine transport via ABC system (n-C14:0, periplasm)

PE141abcpp

Phosphatidylethanolamine transport via ABC system (n-C14:1, periplasm)

PE160abcpp

Phosphatidylethanolamine transport via ABC system (n-C16:0, periplasm)

PE161abcpp

Phosphatidylethanolamine transport via ABC system (n-C16:1, periplasm)

PE180abcpp

Phosphatidylethanolamine transport via ABC system (n-C18:0, periplasm)

PE181abcpp

Phosphatidylethanolamine transport via ABC system (n-C18:1, periplasm)

PFK

Phosphofructokinase

PG120abcpp

Phosphatidylglycerol transport via ABC system (n-C12:0, periplasm)

PG140abcpp

Phosphatidylglycerol transport via ABC system (n-C14:0, periplasm)

PG141abcpp

Phosphatidylglycerol transport via ABC system (n-C14:1, periplasm)

PG160abcpp

Phosphatidylglycerol transport via ABC system (n-C16:0, periplasm)

PG161abcpp

Phosphatidylglycerol transport via ABC system (n-C16:1, periplasm)

PG180abcpp

Phosphatidylglycerol transport via ABC system (n-C18:0, periplasm)

PG181abcpp

Phosphatidylglycerol transport via ABC system (n-C18:1, periplasm)

PGK

Phosphoglycerate kinase

PGLUSYN

Poly glutamate synthesis Reaction

PGP120abcpp

Phosphatidylglycerophosphate transport via ABC system (n-C12:0, periplasm)

PGP140abcpp

Phosphatidylglycerophosphate transport via ABC system (n-C14:0, periplasm)

PGP141abcpp

Phosphatidylglycerophosphate transport via ABC system (n-C14:1, periplasm)

PGP160abcpp

Phosphatidylglycerophosphate transport via ABC system (n-C16:0, periplasm)

PGP161abcpp

Phosphatidylglycerophosphate transport via ABC system (n-C16:1, periplasm)

PGP180abcpp

Phosphatidylglycerophosphate transport via ABC system (n-C18:0, periplasm)

PGP181abcpp

Phosphatidylglycerophosphate transport via ABC system (n-C18:1, periplasm)

PHEPS

Phenylphosphate synthase

PHETRS

Phenylalanyl-tRNA synthetase

PIuabcpp

Phosphate transport via ABC system (uptake, periplasm)

PMPK

Phosphomethylpyrimidine kinase

PNTK

Pantothenate kinase

PPAKr

Propionate kinase

PPCK

Phosphoenolpyruvate carboxykinase

PPCOAC

Propionyl-CoA carboxylase

PPDK

Pyruvate,phosphate dikinase.

PPK

Polyphosphate kinase

PPK2

Polyphosphate kinase

PPS

Phosphoenolpyruvate synthase

PRAGSr

Phosphoribosylglycinamide synthase

PRAIS

Phosphoribosylaminoimidazole synthase

PRASCSi

Phosphoribosylaminoimidazolesuccinocarboxamide synthase

PRFGS

Phosphoribosylformylglycinamidine synthase

PROTRS

Prolyl-tRNA synthetase

PRPPS

Phosphoribosylpyrophosphate synthetase

PS120abcpp

Phosphatidylserine transport via ABC system (n-C12:0, periplasm)

PS140abcpp

Phosphatidylserine transport via ABC system (n-C14:0, periplasm)

PS141abcpp

Phosphatidylserine transport via ABC system (n-C14:1, periplasm)

PS160abcpp

Phosphatidylserine transport via ABC system (n-C16:0, periplasm)

PS161abcpp

Phosphatidylserine transport via ABC system (n-C16:1, periplasm)

PS180abcpp

Phosphatidylserine transport via ABC system (n-C18:0, periplasm)

PS181abcpp

Phosphatidylserine transport via ABC system (n-C18:1, periplasm)

PTPATi

Pantetheine-phosphate adenylyltransferase

PYK

Pyruvate kinase

RBFK

Riboflavin kinase

RBK

Ribokinase

SADT2

Sulfate adenyltransferase

SELNPS

Selenophosphate synthase

SERTRS

Seryl-tRNA synthetase

SHKK

Shikimate kinase

SO3abcpp

Sulfite transport via ABC system (periplasm)

SUCOAS

Succinyl-CoA synthetase (ADP-forming)

SULabcpp

Sulfate transport via ABC system (periplasm)

SULFACabcpp

Sulfoacetate transport via ABC system (periplasm)

TAURabcpp

Taurine transport via ABC system (periplasm)

TDSK

Tetraacyldisaccharide 4'kinase

TDSKN

Tetraacyldisaccharide 4'kinase (glucosediaminyl)

THRTRS

Threonyl-tRNA synthetase

THZPSN3

Thiazole phosphate synthesis

TMPK

Thiamine-phosphate kinase

TRPTRS

Tryptophanyl-tRNA synthetase

TSULabcpp

Thiosulfate transport via ABC system (periplasm)

TUNGSabcpp

Tungstate transport via ABC system (periplasm)

TYRTRS

Tyrosyl-tRNA synthetase

UAAGDS

UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate synthetase

UAMAGS

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase

UAMAS

UDP-N-acetylmuramoyl-L-alanine synthetase

UGMDDS

UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine synthetase

UM3PL

UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase

UM4PL

UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate-D-alanine ligase

UMPK

UMP kinase

VALabcpp

L-valine transport via ABC system (periplasm)

VALTRS

Valyl-tRNA synthetase

ZNabcpp

Zinc (Zn+2) transport via ABC system (periplasm)