ACCOAC

Acetyl-CoA carboxylase

ACGK

Acetylglutamate kinase

ACKr

Acetate kinase

ADK1

Adenylate kinase

ALAabc

L-alanine transport via ABC system

ALAALAr

D-alanine-D-alanine ligase (reversible)

ALATRS

Alanyl-tRNA synthetase

ARBabc

L-arabinose transport via ABC system

ARGSS

Argininosuccinate synthase

ARGTRS

Arginyl-tRNA synthetase

ASNTRAT

Aspartyl-tRNA(Asn) amidotransferase

ASPK

Aspartate kinase

ASPTRS

Aspartyl-tRNA synthetase

ASPTRS_Asn

Aspartyl-tRNA synthetase (Asn)

ATPPRT

ATP phosphoribosyltransferase

ATPS1

H+-exporting ATPase

ATPS10_3

ATP synthase (10 protons for three ATP)

ATPS4r

ATP synthase (four protons for one ATP)

BACCL

Biotin acetyl CoA carboxylase ligase

BIOMASS_Ecoli_TM

Biomass Thermotoga - values taken from iJR904

BUTKr

Butyrate kinase

CBPS

Carbamoyl-phosphate synthase (glutamine-hydrolysing)

CDPMEK

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase

CEL6abc

Oligo-cellulose (6) transport via ABC system

CELabc

Oligo-cellulose transport via ABC system

CELLBabc

Cellobiose transport via ATP transporter

CTPS2

CTP synthase (glutamine)

CYSTRS

Cysteinyl-tRNA synthetase

CYTK1

Cytidylate kinase (CMP)

CYTK2

Cytidylate kinase (dCMP)

DDGLK

2-dehydro-3-deoxygluconokinase

DHFS

Dihydrofolate synthase

DPCOAK

Dephospho-CoA kinase

DRBK

Deoxyribokinase

DTMPK

DTMP kinase

DURIK1

Deoxyuridine kinase (ATP:Deoxyuridine)

FE3abc

Iron (III) transport via ABC system

FMNAT

FMN adenylyltransferase

FPGS_tm

Folylpolyglutamate synthetase TM

FRUabc

Fructose transport via ATP transporter

FRUK

Fructose-1-phosphate kinase

FTHFLi

Formate-tetrahydrofolate ligase

GALabc

D-galactose transport via ABC system

GALKr

Galactokinase

GALMAN4abc

Galactomannan transport via ABC system

GALMAN6abc

Galactomannan transport via ABC system

GK1

Guanylate kinase (GMP:ATP)

GLCabc

D-glucose transport via ABC system

GLCMAN4abc

Glucomannan transport via ABC system

GLCMAN6abc

Glucomannan transport via ABC system

GLGC

Glucose-1-phosphate adenylyltransferase

GLNS

Glutamine synthetase

GLNSP2

Glutamine synthetase (uaaGgla)

GLNTRAT

Glutamyl-tRNA(Gln) amidotransferase

GLU5K

Glutamate 5-kinase

GLUCAN2abc

Glucan transport via ATP transporter

GLUCANabc

Glucan transport via ATP transporter

GLUTRS

Glutamyl-tRNA synthetase

GLUTRS_Gln

Glutamyl-tRNA synthetase (Gln)

GLYC3Pabc

Sn-Glycerol 3-phosphate transport via ABC system

GLYCK2

Glycerate kinase

GLYK

Glycerol kinase

GLYTRS

Glycyl-tRNA synthetase

GMPS2

GMP synthase

GNK

Gluconokinase

HCO3abc

Bicarbonate transport via ABC

HEX1

Hexokinase (D-glucose:ATP)

HEX4

Hexokinase (D-mannose:ATP)

HEX7

Hexokinase (D-fructose:ATP)

HISTRS

Histidyl-tRNA synthetase

HMPK1

Hydroxymethylpyrimidine kinase (ATP)

HPPK

2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase

HSK

Homoserine kinase

ILEabc

L-isoleucine transport via ABC system

ILETRS

Isoleucyl-tRNA synthetase

INSTabc

Inositol transport in via ABC transport

LCTSabc

Lactose transport via ABC system (import)

LEUabc

L-leucine transport via ABC system

LEUTRS

Leucyl-tRNA synthetase

LMN2abc

Laminoribiose transport via ABC-transporter

LYSTRS

Lysyl-tRNA synthetase

MALTabc

Maltose transport via ABC system

MALTTRabc

Maltotriose transport via ABC system

MALTTTRabc

Maltotetraose transport via ABC system

MANabc

Mannose transport via ABC transporter

MANBabc

Mannobiose transport via ABC transporter

MANTRabc

Mannotriose transport via ABC transporter

MANTTRabc

Mannotetraose transport via ABC transporter

MELIBabc

Melibiose transport via ABC system (import)

METAT

Methionine adenosyltransferase

METTRS

Methionyl-tRNA synthetase

NADK

NAD kinase

NADS1

NAD synthase (nh3)

NDPK2

Nucleoside-diphosphate kinase (ATP:UDP)

NDPK3

Nucleoside-diphosphate kinase (ATP:CDP)

NDPK4

Nucleoside-diphosphate kinase (ATP:dTDP)

NDPK5

Nucleoside-diphosphate kinase (ATP:dGDP)

NDPK7

Nucleoside-diphosphate kinase (ATP:dCDP)

NDPK8

Nucleoside-diphosphate kinase (ATP:dADP)

NMNAT

Nicotinamide-nucleotide adenylyltransferase

NNATr

Nicotinate-nucleotide adenylyltransferase

NTPP6

Nucleoside triphosphate pyrophosphorylase (atp)

PANTS

Pantothenate synthase

PC

Pyruvate carboxylase

PFK

Phosphofructokinase

PGK

Phosphoglycerate kinase

PHETRS

Phenylalanyl-tRNA synthetase

PIabc

Phosphate transport via ABC system

PMPK

Phosphomethylpyrimidine kinase

PNTK

Pantothenate kinase

PPCOAC

Propionyl-CoA carboxylase

PPDK

Pyruvate,phosphate dikinase.

PRAGSr

Phosphoribosylglycinamide synthase

PRAIS

Phosphoribosylaminoimidazole synthase

PRASCSi

Phosphoribosylaminoimidazolesuccinocarboxamide synthase

PRFGS

Phosphoribosylformylglycinamidine synthase

PROTRS

Prolyl-tRNA synthetase

PRPPS

Phosphoribosylpyrophosphate synthetase

PTPATi

Pantetheine-phosphate adenylyltransferase

PTRCabc

Putrescine transport via ABC system

PYK

Pyruvate kinase

RAFFabc

Raffinose transport via ABC system (import)

RBFK

Riboflavin kinase

RBK

Ribokinase

RBK_L1

L-ribulokinase (L-ribulose)

RIBabc

D-ribose transport via ABC system

RMK

Rhamnulokinase

RMNabc

L-rhamnose transport (ATP-dependent)

RNTR1

Ribonucleoside triphosphate reductase ATP

SERTRS

Seryl-tRNA synthetase

SHKK

Shikimate kinase

SPMDabc

Spermidine transport via ABC system

SUCOAS

Succinyl-CoA synthetase (ADP-forming)

SUCRabc

Sucrose transport in via ABC transport

THRabc

L-threonine transport via ABC system

THRTRS

Threonyl-tRNA synthetase

THZPSN

Thiazole phosphate synthesis

TMDK1

Thymidine kinase (ATP:thymidine)

TMPK

Thiamine-phosphate kinase

TREabc

Trehalose transport via ABC system

TRPTRS

Tryptophanyl-tRNA synthetase

TYRTRS

Tyrosyl-tRNA synthetase

UAAGLS2

UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysine synthetase (gamma-glutamate)

UAMAGS

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase

UAMAS

UDP-N-acetylmuramoyl-L-alanine synthetase

UGLDDS2

UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D-alanyl-D-alanine synthetase (gamma-glutamate)

UMPK

UMP kinase

URIDK2r

Uridylate kinase (dUMP)

URIK1

Uridine kinase ATPUridine

VALabc

L-valine transport via ABC system

VALTRS

Valyl-tRNA synthetase

XYL3abc

Xylotriose ABC transport

XYLabc

D-xylose transport via ABC system

XYLANabc

Oligo-xylan ABC transport

XYLBabc

Xylobiose ABC transport

XYLK

Xylulokinase

ZNabc

Zinc transport via ABC system