2DGULRGx

2-Dehydro-L-gulonate reductase to gluconate (NADH)

2DGULRx

2-dehydro-L-gulonate reductase (NADH)

3HCINNMH

3-hydroxycinnamate hydroxylase

3HPAOX

HPA monooxygenase

3HPPPNH

3-(3-hydroxy-phenyl)propionate hydroxylase

ABUTD

Aminobutyraldehyde dehydrogenase

ACALD

Acetaldehyde dehydrogenase (acetylating)

AKGDH

2-Oxogluterate dehydrogenase

ALCD19

Alcohol dehydrogenase (glycerol)

ALCD2x

Alcohol dehydrogenase (ethanol)

ALCD3ir

Alcohol dehydrogenase Propanal

ALDD2x

Aldehyde dehydrogenase (acetaldehyde, NAD)

ALDD4

Aldehyde dehydrogenase (butanal, NAD)

ALR4x

Aldose reductase (acetol)

AMPMS2

4-amino-2-methyl-5-phosphomethylpyrimidine synthetase

APPLDHr

Aminopropanol dehydrogenase reversible

BIOMASS_Ec_iJO1366_core_53p95M

E. coli biomass objective function (iJO1366) - core - with 53.95 GAM estimate

BIOMASS_Ec_iJO1366_WT_53p95M

E. coli biomass objective function (iJO1366) - WT - with 53.95 GAM estimate

BSORx

Biotin sulfoxide reductase

CHOLD

Choline dehydrogenase

CINNDO

Cinnamate dioxygenase

CMCMSAD

4 carboxy 2 hydroxymuconate 6 semialdehyde dehydrogenase

DHBD

2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

DHCIND

2,3-dihydroxycinnamate dehydrogenase

DHPPD

2,3-dihydroxyphenylpropionate dehydrogenase

DHPTDNRN

Dihydropteridine reductase (NADH)

DKGLCNR2x

2,5-diketo-D-gluconate reductase (NADH)

DMPPS

1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (dmpp)

DURADx

Dihydrouracil dehydrogenase (NAD)

E4PD

Erythrose 4-phosphate dehydrogenase

EAR100x

Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C10:0)

EAR120x

Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C12:0)

EAR121x

Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C12:1)

EAR140x

Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C14:0)

EAR141x

Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C14:1)

EAR160x

Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C16:0)

EAR161x

Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C16:1)

EAR180x

Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C18:0)

EAR181x

Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C18:1)

EAR40x

Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C4:0)

EAR60x

Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C6:0)

EAR80x

Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C8:0)

FADRx

FAD reductase

FALDH2

Formaldehyde dehydrogenase

FLVRx

Flavin reductase (NAD)

FMNRx

FMN reductase

GALCTLO

L-galactonate oxidoreductase

GAPD

Glyceraldehyde-3-phosphate dehydrogenase

GHBDHx

Gamma-hydroxybutyrate dehydrogenase (NADH)

GLTPD

Galactitol-1-phosphate dehydrogenase

GLYCDx

Glycerol dehydrogenase

GLYCL

Glycine Cleavage System

GLYCLTDx

Glycolate dehydrogenase (NAD)

HACD1

3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA)

HACD1i

3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA)

HACD2

3-hydroxyacyl-CoA dehydrogenase (3-oxohexanoyl-CoA)

HACD2i

3-hydroxyacyl-CoA dehydrogenase (3-oxohexanoyl-CoA)

HACD3

3-hydroxyacyl-CoA dehydrogenase (3-oxooctanoyl-CoA)

HACD3i

3-hydroxyacyl-CoA dehydrogenase (3-oxooctanoyl-CoA)

HACD4

3-hydroxyacyl-CoA dehydrogenase (3-oxodecanoyl-CoA)

HACD4i

3-hydroxyacyl-CoA dehydrogenase (3-oxodecanoyl-CoA)

HACD5

3-hydroxyacyl-CoA dehydrogenase (3-oxododecanoyl-CoA)

HACD5i

3-hydroxyacyl-CoA dehydrogenase (3-oxododecanoyl-CoA)

HACD6

3-hydroxyacyl-CoA dehydrogenase (3-oxotetradecanoyl-CoA)

HACD6i

3-hydroxyacyl-CoA dehydrogenase (3-oxotetradecanoyl-CoA)

HACD7

3-hydroxyacyl-CoA dehydrogenase (3-oxohexadecanoyl-CoA)

HACD7i

3-hydroxyacyl-CoA dehydrogenase (3-oxohexadecanoyl-CoA)

HACD8

3-hydroxyacyl-CoA dehydrogenase (3-oxooctadecanoyl-CoA), peroxisomal

HACD8i

3-hydroxyacyl-CoA dehydrogenase (3-oxooctadecanoyl-CoA)

HISTD

Histidinol dehydrogenase

HPA3MO

4 hydroxyphenylacetate 3 monooxygenase nadh

HPYRRx

Hydroxypyruvate reductase (NADH)

HXAND

Hypoxanthine dehydrogenase

IDOND

L-idonate 5-dehydrogenase

IMPD

IMP dehydrogenase

IPDPS

1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (ipdp)

IPMD

3-isopropylmalate dehydrogenase

LALDO2x

D-Lactaldehyde:NAD+ 1-oxidoreductase

LCARR

Lacaldehyde reductase (R-propane-1,2-diol forming)

LCARS

Lacaldehyde reductase (S-propane-1,2-diol forming)

LDH_D

D-lactate dehydrogenase

LIPOS

Lipoate synthase

M1PD

Mannitol-1-phosphate 5-dehydrogenase

MALDDH

Malate decarboxylating oxidoreductase (decarboxylating)

MANAO

Mannonate oxidoreductase

MDH

Malate dehydrogenase

ME1

Malic enzyme (NAD)

MECDPDH2

2C-methyl-D-erythritol 2,4 cyclodiphosphate dehydratase

MMSAD2

Methylmalonate-semialdehyde dehydrogenase (propanol)

MOADSUx

MoaD sulfuration (nadh, assumed)

MTHFR2

5,10-methylenetetrahydrofolate reductase (NADH)

NADDP

NAD diphosphatase

NADH10

NADH dehydrogenase (menaquinone-8 & 0 protons)

NADH16pp

NADH dehydrogenase (ubiquinone-8 & 3 protons) (periplasm)

NADH17pp

NADH dehydrogenase (menaquinone-8 & 3 protons) (periplasm)

NADH18pp

NADH dehydrogenase (demethylmenaquinone-8 & 3 protons) (periplasm)

NADH5

NADH dehydrogenase (ubiquinone-8 )

NADH9

NADH dehydrogenase (demethylmenaquinone-8 & 0 protons)

NADK

NAD kinase

NADN

NAD nucleosidase

NADPPPS

NADP phosphatase

NADS1

NAD synthase (nh3)

NADTRHD

NAD transhydrogenase

NHFRBO

NADH:flavorubredoxin oxidoreductase

NMNAT

Nicotinamide-nucleotide adenylyltransferase

NODOx

Nitric oxide dioxygenase

NTRIR2x

Nitrite Reductase (NADH)

OMMBLHX3

2-Octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (anaerobic)

OMPHHX3

2-octaprenyl-6-methoxyphenol hydroxylase (anaerobic)

OPHHX3

2-Octaprenylphenol hydroxylase (anaerobic)

OXPTNDH

Glutarate-semialdehyde:NAD+ oxidoreductase

P5CD

1-pyrroline-5-carboxylate dehydrogenase

PDH

Pyruvate dehydrogenase

PDX5PO2

Pyridoxine 5'-phosphate oxidase (anaerboic

PDX5PS

Pyridoxine 5'-phosphate synthase

PERD

Erythronate 4-phosphate (4per) dehydrogenase

PGCD

Phosphoglycerate dehydrogenase

POAACR

Peroxyaminoacrylate reductase

PPND

Prephenate dehydrogenase

PPPNDO

Phenylpropanoate Dioxygenase

PPRDNDH

Piperideine dehydrogenase

PYROX

Pyrimidine oxygenase

QUINDH

Quinate dehydrogenase

SGSAD

Succinylglutamic semialdehyde dehydrogenase

SHCHD2

Sirohydrochlorin dehydrogenase (NAD)

SSALx

Succinate-semialdehyde dehydrogenase (NAD)

TAGURr

Tagaturonate reductase

THD2pp

NAD(P) transhydrogenase (periplasm)

THRD

L-threonine dehydrogenase

TRSARr

Tartronate semialdehyde reductase

UACMAMO

UDP-N-acetyl-D-mannosamine oxidoreductase

UDPGD

UDPglucose 6-dehydrogenase

UDPGDC

UDP-glucuronate C-4'' decarboxylase

XAND

Xanthine dehydrogenase