Gene: s0001


Descriptive name:

Model:

iECO111_1330

Chromosome:

Gene is not mapped to a genome annotation.

Associated reactions:

BiGG ID
Name
Gene reaction rule
ACALDtpp
Acetaldehyde reversible transport (periplasm)
s0001
ACONIs
Aconitate isomerase (spontaneous)
s0001
AOBUTDs
L-2-amino-3-oxobutanoate decarboxylation (spontaneous)
s0001
ARBTNexs
Aerobactin Fe-loading reaction (spontaneous)
s0001
ATPHs
ATP amine hydrolysis (spontaneous)
s0001
CBMD
Carbamate deaminase
s0001
CO2tpp
CO2 transporter via diffusion (periplasm)
s0001
CPGNexs
Coprogen Fe-loading reaction (spontaneaous)
s0001
DATPHs
DATP amine hydrolysis (spontaneous)
s0001
DHPTDCs2
4,5-dihydroxy-2,3-pentanedione cyclization (spontaneous)
s0001
DMSOtpp
Dimethyl sulfoxide transport via diffusion (periplasm)
s0001
ETOHtrpp
Ethanol reversible transport via diffusion (periplasm)
s0001
FALDtpp
Formaldehyde transport via diffusion (periplasm)
s0001
FALGTHLs
Formaldehyde glutathione ligase (spontaneous)
s0001
FE3HOXexs
Fe(III) hydroxamate Fe-loading reaction (spontaneaous)
s0001
FECRMexs
Ferrichrome Fe(III)-loading reaction (spontaneous)
s0001
FEENTERexs
Enterobactin Fe(III) binding (spontaneous)
s0001
FEOXAMexs
Ferroxamine Fe3-loading reaction (spontaneous)
s0001
FESD1s
Iron-sulfur cluster damage (peroxide, spontaneous)
s0001
FESD2s
Iron-sulfur cluster damage (nitrous oxide, spontaneous)
s0001
G5SADs
L-glutamate 5-semialdehyde dehydratase (spontaneous)
s0001
GLYCtpp
Glycerol transport via channel (periplasm)
ECO111_4750 or s0001
GTPHs
GTP amine hydrolysis (spontaneous)
s0001
H2Otex
H2O transport via diffusion (extracellular to periplasm)
s0001 or ECO111_1025 or ECO111_4695 or ECO111_2952 or ECO111_0303 or ECO111_1704 or ECO111_1769 or ECO111_0997
H2Otpp
H2O transport via diffusion (periplasm)
s0001 or ECO111_0944
H2St1pp
H2s transport (periplasm)
s0001
H2tpp
Hydrogen transport diffusion (periplasm)
s0001
MEOHtrpp
Methanol reversible transport via diffusion (periplasm)
s0001
METOX1s
Methionine oxidation (spontaneous)
s0001
METOX2s
Methionine oxidation 2 (spontaneous)
s0001
MTHTHFSs
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran synthesis (spontaneous)
s0001
N2Otpp
Nitrious oxide transport (diffusion)
s0001
NH4tpp
Ammonia reversible transport (periplasm)
ECO111_0484 or s0001
NOVBCNtex
Novobiocin transport via diffusion (extracellular to periplasm)
s0001
NOtpp
NO transport (diffusion)
s0001
O2tpp
O2 transport via diffusion (periplasm)
s0001
OMCDC
2-Oxo-4-methyl-3-carboxypentanoate decarboxylation
s0001
RFAMPtex
Rifampin transport via diffusion (extracellular to periplasm)
s0001
SO2tpp
SO2 transport via diffusion (periplasm)
s0001
SALCHS4FEexs
Salmochelin S4 Fe III binding spontaneous
s0001
SALCHS2FEexs
Salmochelin s2 Fe III sequestration
s0001
DHPTDCs
4,5-dihydroxy-2,3-pentanedione cyclization (spontaneous)
s0001

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External database links

Old identifiers

    s0001

Latest BiGG Models publication:

King ZA, Lu JS, Dräger A, Miller PC, Federowicz S, Lerman JA, Ebrahim A, Palsson BO, and Lewis NE. BiGG Models: A platform for integrating, standardizing, and sharing genome-scale models (2016) Nucleic Acids Research 44(D1):D515-D522. doi:10.1093/nar/gkv1049


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