Reaction: PDTS

Reaction appears 2 times in iYS854 ?

Descriptive name:

Peptidoglycan dimer transpeptidation (short strand)

Model:

iYS854

Reaction:

9.0 h2o_c + 6.0 pepd_w → 12.0 ala__D_c + 6.0 h_c + PG_ST_w + 5.0 udcpdp_w

Metabolites:

Stoichiometry
BiGG ID
Name
12.0
ala__D_c
D-Alanine
6.0
h_c
H+
-9.0
h2o_c
H2O H2O
1.0
PG_ST_w
Acetylglucosamine--N-acetylmuramoyl-(tetrapeptide) diphospho-undecaprenol dimer with L-(gly)5-D cross-link strand length 6
-6.0
pepd_w
Peptide C2H4NO2RC2H2NOR
5.0
udcpdp_w
Undecaprenyl diphosphate

PDTS_copy1

Default bounds:

(0.0, 1000.0)

Objective coefficient:

0.0

Subsystem:

Cell Wall/Membrane/Envelope Metabolism

Gene Reaction Rule:

(USA300HOU_RS05935 and USA300HOU_RS07420) or (USA300HOU_RS05935 and USA300HOU_RS00160) or (USA300HOU_RS05935 and USA300HOU_RS07420 and USA300HOU_RS10170) or (USA300HOU_RS05935 and USA300HOU_RS00160 and USA300HOU_RS10170)

Genes:

USA300HOU_RS00160
USA300HOU_RS07420
USA300HOU_RS10170
USA300HOU_RS05935

PDTS_copy2

Default bounds:

(0.0, 1000.0)

Objective coefficient:

0.0

Subsystem:

Cell Wall/Membrane/Envelope Metabolism

Gene Reaction Rule:

(USA300HOU_RS05935 and USA300HOU_RS07420 and USA300HOU_RS00160) or (USA300HOU_RS05935 and USA300HOU_RS07420 and USA300HOU_RS00160 and USA300HOU_RS10170)

Genes:

USA300HOU_RS00160
USA300HOU_RS05935
USA300HOU_RS10170
USA300HOU_RS07420

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Universal reaction ?

External database links

Old identifiers

    PDTS, PDTSB

PDTS in other models