Reaction: PDTL

Reaction appears 2 times in iYS854 ?

Descriptive name:

Peptidoglycan dimer transpeptidation (long strand)

Model:

iYS854

Reaction:

78.0 h2o_c + 26.0 pepd_w → 94.0 ala__D_c + 26.0 h_c + PG__L_w + 25.0 udcpdp_w

Metabolites:

Stoichiometry
BiGG ID
Name
94.0
ala__D_c
D-Alanine
26.0
h_c
H+
-78.0
h2o_c
H2O H2O
1.0
PG__L_w
Acetylglucosamine--N-acetylmuramoyl-(tetrapeptide) diphospho-undecaprenol dimer with L-(gly)5-D cross-link strand length 26
-26.0
pepd_w
Peptide C2H4NO2RC2H2NOR
25.0
udcpdp_w
Undecaprenyl diphosphate

PDTL_copy1

Default bounds:

(0.0, 1000.0)

Objective coefficient:

0.0

Subsystem:

Cell Wall/Membrane/Envelope Metabolism

Gene Reaction Rule:

(USA300HOU_RS05935 and USA300HOU_RS07420 and USA300HOU_RS03475) or (USA300HOU_RS05935 and USA300HOU_RS00160 and USA300HOU_RS03475) or (USA300HOU_RS05935 and USA300HOU_RS07420 and USA300HOU_RS10170 and USA300HOU_RS03475) or (USA300HOU_RS05935 and USA300HOU_RS00160 and USA300HOU_RS10170 and USA300HOU_RS03475)

Genes:

USA300HOU_RS00160
USA300HOU_RS05935
USA300HOU_RS07420
USA300HOU_RS10170
USA300HOU_RS03475

PDTL_copy2

Default bounds:

(0.0, 1000.0)

Objective coefficient:

0.0

Subsystem:

Cell Wall/Membrane/Envelope Metabolism

Gene Reaction Rule:

(USA300HOU_RS05935 and USA300HOU_RS07420 and USA300HOU_RS00160 and USA300HOU_RS03475) or (USA300HOU_RS05935 and USA300HOU_RS07420 and USA300HOU_RS00160 and USA300HOU_RS10170 and USA300HOU_RS03475)

Genes:

USA300HOU_RS00160
USA300HOU_RS05935
USA300HOU_RS07420
USA300HOU_RS10170
USA300HOU_RS03475

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Universal reaction ?

External database links

Old identifiers

    PDTL, PDTLB

PDTL in other models