Reaction: BIOMASS_

Pseudoreaction ?

Descriptive name:

Biomass

Model:

iYL1228

Reaction:

0.007 adphep_LD_c + 0.621 ala__L_c + 0.306 arg__L_c + 0.204 asn__L_c + 0.31 asp__L_c + 71.785 atp_c + 0.117 ctp_c + 0.078 cys__L_c + 0.017 datp_c + 0.022 dctp_c + 0.022 dgtp_c + 0.142 dtdprmn_c + 0.017 dttp_c + 0.011 gam6p_c + 0.251 gln__L_c + 0.304 glu__L_c + 0.539 gly_c + 0.124 gtp_c + 66.51913 h2o_c + 0.089 his__L_c + 0.199 ile__L_c + 0.005 kdo_c + 0.383 leu__L_c + 0.0204 lipidA_c + 0.239 lys__L_c + 0.053 man1p_c + 0.095 met__L_c + 0.01148 pe160_c + 0.00364 pe161_c + 0.00224 pe181_c + 0.001185 pg160_c + 0.000377 pg161_c + 0.000215 pg181_c + 0.211 phe__L_c + 0.191 pro__L_c + 0.444 ser__L_c + 0.265 thr__L_c + 0.066 trp__L_c + 0.0408 ttdca_c + 0.066 tyr__L_c + 0.003 udpg_c + 0.076 udpgal_c + 0.107 utp_c + 0.319 val__L_c + 0.0013 clpn160_p + 0.0004 clpn161_p + 0.0002 clpn181_p + 0.011 murein5px4p_p + 0.02952 pe160_p + 0.00936 pe161_p + 0.00576 pe181_p + 0.001015 pg160_p + 0.000323 pg161_p + 0.000185 pg181_p + 0.001 udpgalur_c → 71.7 adp_c + 71.7 h_c + 71.7 pi_c + 0.51169 ppi_c

Metabolites:

Stoichiometry
BiGG ID
Name
71.7
adp_c
ADP C10H12N5O10P2
-0.007
adphep_LD_c
ADP-L-glycero-D-manno-heptose
-0.621
ala__L_c
L-Alanine
-0.306
arg__L_c
L-Arginine
-0.204
asn__L_c
L-Asparagine
-0.31
asp__L_c
L-Aspartate
-71.785
atp_c
ATP C10H12N5O13P3
-0.117
ctp_c
CTP C9H12N3O14P3
-0.078
cys__L_c
L-Cysteine
-0.017
datp_c
DATP C10H12N5O12P3
-0.022
dctp_c
DCTP C9H12N3O13P3
-0.022
dgtp_c
DGTP C10H12N5O13P3
-0.142
dtdprmn_c
DTDP-L-rhamnose
-0.017
dttp_c
DTTP C10H13N2O14P3
-0.011
gam6p_c
D-Glucosamine 6-phosphate
-0.251
gln__L_c
L-Glutamine
-0.304
glu__L_c
L-Glutamate
-0.539
gly_c
Glycine
-0.124
gtp_c
GTP C10H12N5O14P3
71.7
h_c
H+
-66.51913
h2o_c
H2O H2O
-0.089
his__L_c
L-Histidine
-0.199
ile__L_c
L-Isoleucine
-0.005
kdo_c
3-Deoxy-D-manno-2-octulosonate
-0.383
leu__L_c
L-Leucine
-0.0204
lipidA_c
2,3,2'3'-Tetrakis(beta-hydroxymyristoyl)-D-glucosaminyl-1,6-beta-D-glucosamine 1,4'-bisphosphate
-0.239
lys__L_c
L-Lysine
-0.053
man1p_c
D-Mannose 1-phosphate
-0.095
met__L_c
L-Methionine
-0.01148
pe160_c
Phosphatidylethanolamine (dihexadecanoyl, n-C16:0)
-0.00364
pe161_c
Phosphatidylethanolamine (dihexadec-9enoyl, n-C16:1)
-0.00224
pe181_c
Phosphatidylethanolamine (dioctadec-11-enoyl, n-C18:1)
-0.001185
pg160_c
Phosphatidylglycerol (dihexadecanoyl, n-C16:0)
-0.000377
pg161_c
Phosphatidylglycerol (dihexadec-9-enoyl, n-C16:1)
-0.000215
pg181_c
Phosphatidylglycerol (dioctadec-11-enoyl, n-C18:1)
-0.211
phe__L_c
L-Phenylalanine
71.7
pi_c
Phosphate
0.51169
ppi_c
Diphosphate
-0.191
pro__L_c
L-Proline
-0.444
ser__L_c
L-Serine
-0.265
thr__L_c
L-Threonine
-0.066
trp__L_c
L-Tryptophan
-0.0408
ttdca_c
Tetradecanoate (n-C14:0)
-0.066
tyr__L_c
L-Tyrosine
-0.003
udpg_c
UDPglucose
-0.076
udpgal_c
UDPgalactose
-0.107
utp_c
UTP C9H11N2O15P3
-0.319
val__L_c
L-Valine
-0.0013
clpn160_p
Cardiolipin (tetrahexadecanoyl, n-C16:0)
-0.0004
clpn161_p
Cardiolipin (tetrahexadec-9-enoyl, n-C16:1)
-0.0002
clpn181_p
Cardiolipin (tetraoctadec-11-enoyl, n-C18:1)
-0.011
murein5px4p_p
Two disacharide linked murein units, pentapeptide crosslinked tetrapeptide (A2pm->D-ala) (middle of chain)
-0.02952
pe160_p
Phosphatidylethanolamine (dihexadecanoyl, n-C16:0)
-0.00936
pe161_p
Phosphatidylethanolamine (dihexadec-9enoyl, n-C16:1)
-0.00576
pe181_p
Phosphatidylethanolamine (dioctadec-11-enoyl, n-C18:1)
-0.001015
pg160_p
Phosphatidylglycerol (dihexadecanoyl, n-C16:0)
-0.000323
pg161_p
Phosphatidylglycerol (dihexadec-9-enoyl, n-C16:1)
-0.000185
pg181_p
Phosphatidylglycerol (dioctadec-11-enoyl, n-C18:1)
-0.001
udpgalur_c
UDPgalacturonate

Default bounds:

(0.0, 1000.0)

Objective coefficient:

1.0

Subsystem:

Biomass and maintenance functions

Gene Reaction Rule:

Genes:

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Universal reaction ?

External database links

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Old identifiers

    Biomass

BIOMASS_ in other models