Gene: ECBD_0560

Descriptive name:

Model:

iECBD_1354

Position:

Left: 574909 – Right: 576342

Strand:

Minus

Chromosome:

CP001665.1

DNA Sequence

ATGCGATTTTCCAGATTTATCATCGGATTGACCAGCTGTATAGCGTTCAGTGTTCAGGCCGCGAATGTTGATGAGTACGTTACTCAACTCCCCGCTGGTGCCAACCTTGCCCTGATGGTGCAAAAAGTCGGCGCGTCGGCCCCCGCTATTGATTACCACAGTCAGCAGATGGCGCTGCCCGCCAGTACGCAGAAAGTGATTACTGCGCTGGCGGCGTTGATTCAACTCGGCCCCGATTTTCGTTTTACCACGACGCTTGAAACCAAAGGCAATGTGGAAAACGGCGTACTTAAGGGTGACTTAGTGGCGCGATTTGGTGCCGATCCGACGTTAAAACGTCAGGATATTCGCAATATGGTCGCGACTTTGAAAAAATCTGGCGTCAACCAAATCGATGGCAATGTGTTGATAGATACCTCCATTTTCGCCAGCCACGATAAAGCCCCCGGCTGGCCATGGAATGACATGACACAATGCTTTAGCGCTCCGCCTGCCGCCGCCATAGTTGACCGCAACTGTTTCTCCGTCTCGCTCTACAGTGCCCAAAAACCCGGTGATATGGCCTTTATACGCGTGGCATCTTATTACCCCGTTACGATGTTCAGCCAGGTACGCACCCTCCCCCGTGGTTCTGCCGAAGCGCAATACTGCGAACTGGATGTGGTGCCAGGCGACCTGAACCGCTTTACGCTGACGGGATGCCTGCCACAACGTTCTGAGCCGCTCCCGTTGGCTTTTGCCGTACAGGATGGAGCCAGCTATGCCGGGGCAATTCTGAAAGATGAGTTAAAACAGGCGGGTATCACCTGGAGTGGAACACTGCTGCGCCAGACTCAGGTTAACGAACCTGGAACGGTAGTTGCCAGTAAACAGTCGGCCCCGCTGCACGATCTGCTTAAGATTATGCTGAAAAAGTCAGACAACATGATCGCCGATACGGTTTTCCGCATGATAGGCCATGCGCGCTTCAATGTGCCTGGAACATGGCGGGCCGGGTCGGACGCCGTGCGTCAGATCCTGCGCCAGCAAGCCGGTGTCGATATTGGAAACACCATTATTGCCGATGGTTCAGGGCTTTCGCGGCATAACCTGATTGCCCCCGCCACCATGATGCAGGTGCTGCAATACATTGCCCAACACGACAATGAACTTAACTTTATCTCCATGCTGCCGCTGGCGGGCTATGACGGCTCTTTGCAGTACCGTGCAGGTCTGCATCAGGCGGGCGTGGATGGCAAAGTCTCAGCGAAAACCGGTTCGTTGCAGGGGGTATATAACCTGGCGGGATTCATTACCACAGCGAGCGGGCAACGAATGGCGTTTGTGCAATATCTTTCTGGCTATGCAGTAGAACCGGCGGATCAGCGTAATCGCCGTATTCCGTTAGTGCGTTTCGAAAGCCGTTTGTATAAAGATATTTACCAGAACAATTAG

Protein Sequence

MRFSRFIIGLTSCIAFSVQAANVDEYVTQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAQKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN

Associated reactions:

BiGG ID
Name
Gene reaction rule
MDDCP1pp
Murein D,D-carboxypeptidase (murein5px4p) (periplasm)
ECBD_3019 or ECBD_0560 or ECBD_2784 or ECBD_1647
MDDCP2pp
Murein D,D-carboxypeptidase (murein5px4px4p) (periplasm)
ECBD_3019 or ECBD_0560 or ECBD_2784 or ECBD_1647
MDDCP3pp
Murein D,D-carboxypeptidase (murein5p5p) (periplasm)
ECBD_3019 or ECBD_0560 or ECBD_2784 or ECBD_1647
MDDCP4pp
Murein D,D-carboxypeptidase (murein5p4p) (periplasm)
ECBD_3019 or ECBD_0560 or ECBD_2784 or ECBD_1647
MDDCP5pp
Murein D,D-carboxypeptidase (murein5p3p) (periplasm)
ECBD_3019 or ECBD_0560 or ECBD_2784 or ECBD_1647
MDDEP1pp
Murein D,D-endopeptidase (murein4px4p) (periplasm)
ECBD_0560 or ECBD_1331 or ECBD_1524
MDDEP2pp
Murein D,D-endopeptidase (murein3px4p) (periplasm)
ECBD_0560 or ECBD_1331 or ECBD_1524
MDDEP3pp
Murein D,D-endopeptidase (murein5px4p) (periplasm)
ECBD_0560 or ECBD_1331 or ECBD_1524
MDDEP4pp
Murein D,D-endopeptidase (murein4px4px4p) (periplasm)
ECBD_0560 or ECBD_1331 or ECBD_1524

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External database links

Provided by MetaNetX (CC BY 4.0)

Old identifiers

    ECBD_0560

Latest BiGG Models publication:

King ZA, Lu JS, Dräger A, Miller PC, Federowicz S, Lerman JA, Ebrahim A, Palsson BO, and Lewis NE. BiGG Models: A platform for integrating, standardizing, and sharing genome-scale models (2016) Nucleic Acids Research 44(D1):D515-D522. doi:10.1093/nar/gkv1049

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