Gene: Gmet_0872

Descriptive name:

nifS-2

Model:

iAF987

Position:

Left: 960680 – Right: 961822

Strand:

Plus

Chromosome:

CP000148.1

DNA Sequence

ATGATGATCTATCTGGACCACAATGCGACAACGCCGGTCCACCCTGATGTGGTGGAGGCGTTGTTGCCGTTTCTGCAGGGGAAGTTCGGCAACCCGTCCAGCATCCACTGGGCCGGTCGGGCCGTGAAGGGGGCGGTGGAGGAGGCCCGGGAACAGGTGTCGGCGCTCGTGGGATGCGAGCCGGGTGAGGTGGTGTTCACCTCGTCGGGAACCGAGGCCGACAACATGGCCATCAAGGGGGTCGCTGCGGCCCTTGGGGGGCGCGGCAACCACATCGTCACCACCCAGGTGGAGCACCCAGGAGTGGCAAACCCCTGCCTCTACCTGGAGAGTCTCGGTTTCGAGGTGACCCGCGTGACCGTGGACCGGGACGGCCTTCTGGACCTGGAGCGGCTGGAGGCGGCCATCACCGACCGGACCATTCTCATCTCGGCCATGGCCGCCAACAACGAGACCGGCGTCCTCTTCCCGGTACGCGAGATCGGTGAGATTGCAGCGTGCCGCCGTGTCTATTTCCACTGCGACGGGGTCCAGGCGGCCGGCAGGATTCCACTCTCGGTCCGGGATGACAGCATCTCGTTTCTGGCCCTCTCGGGGCACAAGCTCTATGCCCCGAAGGGGATAGGAGCCTTGGTGGTGCGGCGCGGGGTGAAGTGCCACCCGCTGATCCATGGTGGCTCCCAGGAGCGCAACCGCCGCGGAGGGACCGAGAACGTGGCCGGCATCGTGGCCTTTGGCAGGGCGTGCGCCATTGCCCGCGAAACCATGAATGGCGAAATGGGGCGGATTAAAGGATTGCGCGACCGGTTGGAAGAGGGGATACTGTCACGGGTTTCCGGCGCCTGCGTGAACGGCCACCGGGAGCAGCGGCTCCCCACCACTACCAATATCACGATTCCCGGTGTGGAGGCCGATTCGCTCCTCATGGCACTGGACCTGGAGGGGATAGCTGCGTCATCGGGCTCCGCGTGCAGTTCCGGCACCCTCAAGCTCTCGCCGGTCCTGGCCGCCATGGGACGCACTCCCGAGGAGGCCAAGGGTTCGGTGCGGTTCTCGCTGGGGAAGGGGAATACCGTCGAGGAGATAGACCGGGTGCTGGCGGTTCTGCCGGCCATCGTTGCCCGGTTGCGGGGAGAATCATGA

Protein Sequence

MMIYLDHNATTPVHPDVVEALLPFLQGKFGNPSSIHWAGRAVKGAVEEAREQVSALVGCEPGEVVFTSSGTEADNMAIKGVAAALGGRGNHIVTTQVEHPGVANPCLYLESLGFEVTRVTVDRDGLLDLERLEAAITDRTILISAMAANNETGVLFPVREIGEIAACRRVYFHCDGVQAAGRIPLSVRDDSISFLALSGHKLYAPKGIGALVVRRGVKCHPLIHGGSQERNRRGGTENVAGIVAFGRACAIARETMNGEMGRIKGLRDRLEEGILSRVSGACVNGHREQRLPTTTNITIPGVEADSLLMALDLEGIAASSGSACSSGTLKLSPVLAAMGRTPEEAKGSVRFSLGKGNTVEEIDRVLAVLPAIVARLRGES

Associated reactions:

BiGG ID
Name
Gene reaction rule
I2FE2SR
ISC [2Fe-2S] regeneration
(Gmet_0992 and Gmet_0991) or (Gmet_0872 and Gmet_0991)
I2FE2SS
ISC [2Fe-2S] Synthesis
(Gmet_0992 and Gmet_0991) or (Gmet_0872 and Gmet_0991)
I2FE2SS2
ISC [2Fe-2S] Synthesis II
(Gmet_0992 and Gmet_0991) or (Gmet_0872 and Gmet_0991)
I2FE2ST
ISC [2Fe-2S] Transfer
(Gmet_0992 and Gmet_0991) or (Gmet_0872 and Gmet_0991)
I4FE4SR
ISC [4Fe-4S] Reduction
(Gmet_0992 and Gmet_0991) or (Gmet_0872 and Gmet_0991)
I4FE4ST
ISC [4Fe-4S] Transfer
(Gmet_0992 and Gmet_0991) or (Gmet_0872 and Gmet_0991)
ICYSDS
ISC Cysteine desulfuration
Gmet_0992 or Gmet_0872
MOADSUx
MoaD sulfuration (nadh, assumed)
(Gmet_1044 and Gmet_0992) or (Gmet_1044 and Gmet_0872)
THZPSN3
Thiazole phosphate synthesis
(Gmet_0992 and Gmet_2935 and Gmet_2855 and Gmet_2933) or (Gmet_0992 and Gmet_2935 and Gmet_1568 and Gmet_2933) or (Gmet_0992 and Gmet_2935 and Gmet_2855 and Gmet_1567) or (Gmet_0992 and Gmet_2935 and Gmet_1568 and Gmet_1567) or (Gmet_0872 and Gmet_2935 and Gmet_2855 and Gmet_2933) or (Gmet_0872 and Gmet_2935 and Gmet_1568 and Gmet_2933) or (Gmet_0872 and Gmet_2935 and Gmet_2855 and Gmet_1567) or (Gmet_0872 and Gmet_2935 and Gmet_1568 and Gmet_1567)

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External database links

Old identifiers

    Gmet_0872

Latest BiGG Models publication:

King ZA, Lu JS, Dräger A, Miller PC, Federowicz S, Lerman JA, Ebrahim A, Palsson BO, and Lewis NE. BiGG Models: A platform for integrating, standardizing, and sharing genome-scale models (2016) Nucleic Acids Research 44(D1):D515-D522. doi:10.1093/nar/gkv1049

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