Gene: UMNK88_3943

Descriptive name:

dacB

Model:

iUMNK88_1353

Position:

Left: 3817614 – Right: 3819047

Strand:

Plus

Chromosome:

CP002729.1

DNA Sequence

ATGCGATTTTCCAGATTTATCATCGGATTGACCAGCTGTATAGCGTTCAGTGTTCAGGCCGCAAATGTTGATGAGTACATTACTCAACTCCCCGCTGGTGCCAACCTTGCCCTGATGGTGCAAAAAGTCGGCGCGTCGGCCCCCGCTATTGATTACCACAGTCAGCAGATGGCGCTGCCTGCCAGTACCCAGAAAGTGATTACTGCGCTGGCGGCGTTGATTCAACTCGGCCCCGATTTTCGTTTTACCACGACGCTTGAAACCAAAGGCAATGTGGAAAACGGCGTACTTAAGGGTGACTTAGTGGCGCGATTTGGTGCCGATCCGACGTTAAAACGTCAGGATATTCGCAATATGGTCGCGACTTTGAAAAAATCTGGCGTCAACCAAATCGATGGCAATGTGTTGATAGATACCTCCATTTTCGCCAGCCACGATAAAGCCCCCGGCTGGCCATGGAATGACATGACACAATGCTTTAGCGCTCCGCCTGCCGCCGCCATAGTTGACCGCAACTGTTTCTCCGTCTCGCTCTACAGTGCCCCAAAGCCTGGTGATATGGCTTTTATACGCGTGGCATCTTATTACCCCGTTACGATGTTCAGCCAGGTACGCACCCTCCCCCGTGGTTCTGCCGAAGCGCAATACTGCGAACTGGATGTGGTGCCAGGCGACCTGAACCGCTTTACGCTGACGGGATGCCTGCCACAACGTTCTGAGCCGCTCCCGTTGGCTTTTGCCGTGCAGGATGGAGCCAGCTATGCCGGTGCAATTCTGAAAGATGAGTTAAAACAGGCGGGTATCACCTGGAGCGGAACACTGCTGCGCCAGACTCAGGTTAACGAACCTGGAACGGTAGTTGCCAGTAAACAGTCGGCCCCGCTGCACGATCTGCTTAAGATTATGCTGAAAAAGTCGGACAACATGATCGCCGATACGGTTTTCCGCATGATAGGCCATGCGCGCTTCAATGTGCCTGGAACATGGCGGGCCGGGTCGGACGCCGTGCGTCAGATCCTGCGCCAGCAAGCCGGTGTCGATATTGGAAACACCAGTATTGCCGATGGTTCAGGGCTTTCGCGGCATAACCTGATTGCCCCCGCCACCATGATGCAGGTGCTGCAATACATTGCCCAACACGACAATGAACTTAACTTTATCTCCATGCTGCCGCTGGCGGGCTATGACGGCTCTTTGCAGTACCGTGCAGGTCTGCATCAGGCGGGCGTGGATGGAAAAGTCTCAGCGAAAACCGGTTCGTTGCAGGGGGTATATAACCTGGCGGGATTCATTACCACAGCGAGCGGGCAACGAATGGCGTTTGTGCAATATCTTTCTGGCTATGCAGTAGAACCTGCGGATCAGCGTAATCGCCGTATTCCGTTAGTGCGTTTTGAAAGCCGTTTGTATAAAGATATTTATCAGAACAATTAG

Protein Sequence

MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTSIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN

Associated reactions:

BiGG ID
Name
Gene reaction rule
MDDCP1pp
Murein D,D-carboxypeptidase (murein5px4p) (periplasm)
UMNK88_667 or UMNK88_3943 or UMNK88_880 or UMNK88_2557
MDDCP2pp
Murein D,D-carboxypeptidase (murein5px4px4p) (periplasm)
UMNK88_667 or UMNK88_3943 or UMNK88_880 or UMNK88_2557
MDDCP3pp
Murein D,D-carboxypeptidase (murein5p5p) (periplasm)
UMNK88_667 or UMNK88_3943 or UMNK88_880 or UMNK88_2557
MDDCP4pp
Murein D,D-carboxypeptidase (murein5p4p) (periplasm)
UMNK88_667 or UMNK88_3943 or UMNK88_880 or UMNK88_2557
MDDCP5pp
Murein D,D-carboxypeptidase (murein5p3p) (periplasm)
UMNK88_667 or UMNK88_3943 or UMNK88_880 or UMNK88_2557
MDDEP1pp
Murein D,D-endopeptidase (murein4px4p) (periplasm)
UMNK88_3943 or UMNK88_2881 or UMNK88_2678
MDDEP2pp
Murein D,D-endopeptidase (murein3px4p) (periplasm)
UMNK88_3943 or UMNK88_2881 or UMNK88_2678
MDDEP3pp
Murein D,D-endopeptidase (murein5px4p) (periplasm)
UMNK88_3943 or UMNK88_2881 or UMNK88_2678
MDDEP4pp
Murein D,D-endopeptidase (murein4px4px4p) (periplasm)
UMNK88_3943 or UMNK88_2881 or UMNK88_2678

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External database links

Old identifiers

    UMNK88_3943

Latest BiGG Models publication:

King ZA, Lu JS, Dräger A, Miller PC, Federowicz S, Lerman JA, Ebrahim A, Palsson BO, and Lewis NE. BiGG Models: A platform for integrating, standardizing, and sharing genome-scale models (2016) Nucleic Acids Research 44(D1):D515-D522. doi:10.1093/nar/gkv1049

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