Gene: SGL_RS16825

Descriptive name:

psbD

Model:

iSynCJ816

Position:

Left: 3229780 – Right: 3230838

Strand:

Plus

Chromosome:

NC_000911.1

DNA Sequence

NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN

Protein Sequence

MTIAVGRAPVERGWFDVLDDWLKRDRFVFIGWSGLLLFPCAFMALGGWLTGTTFVTSWYTHGLASSYLEGANFLTVAVSSPADAFGHSLLFLWGPEAQGNLTRWFQIGGLWPFVALHGAFGLIGFMLRQFEISRLVGIRPYNAIAFSGPIAVFVSVFLMYPLGQSSWFFAPSFGVAGIFRFILFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGEDSNTFRAFEPTQAEETYSMVTANRFWSQIFGIAFSNKRWLHFFMLFVPVTGLWMSSVGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGMRAWMAPQDQPHENFIFPEEVLPRGNAL

Associated reactions:

BiGG ID
Name
Gene reaction rule
SOPSII
Super oxide generation at PSII
SGL_RS11935 and SGL_RS11735 and SGL_RS08205 and SGL_RS08200 and SGL_RS03265 and SGL_RS02070 and SGL_RS09330 and SGL_RS10440 and SGL_RS14825 and SGL_RS16825 and SGL_RS18130 and SGL_RS01910 and SGL_RS11645 and SGL_RS08090 and SGL_RS04525 and SGL_RS12880 and SGL_RS14050 and sml0003 and SGL_RS04440 and SGL_RS07800 and SGL_RS13125 and SGL_RS04535 and SGL_RS04540 and SGL_RS04545 and smr0009 and SGL_RS07325 and SGL_RS04530 and SGL_RS02645 and SGL_RS02635
PSIIa
Photosystem II
SGL_RS11935 and SGL_RS11735 and SGL_RS08205 and SGL_RS08200 and SGL_RS03265 and SGL_RS02070 and SGL_RS09330 and SGL_RS10440 and SGL_RS14825 and SGL_RS16825 and SGL_RS18130 and SGL_RS01910 and SGL_RS11645 and SGL_RS08090 and SGL_RS04525 and SGL_RS12880 and SGL_RS14050 and sml0003 and SGL_RS04440 and SGL_RS07800 and SGL_RS13125 and SGL_RS04535 and SGL_RS04540 and SGL_RS04545 and smr0009 and SGL_RS07325 and SGL_RS04530 and SGL_RS02645 and SGL_RS02635
PSIIb
Photosystem II (PQn)
SGL_RS11935 and SGL_RS11735 and SGL_RS08205 and SGL_RS08200 and SGL_RS03265 and SGL_RS02070 and SGL_RS09330 and SGL_RS10440 and SGL_RS14825 and SGL_RS16825 and SGL_RS18130 and SGL_RS01910 and SGL_RS11645 and SGL_RS08090 and SGL_RS04525 and SGL_RS12880 and SGL_RS14050 and sml0003 and SGL_RS04440 and SGL_RS07800 and SGL_RS13125 and SGL_RS04535 and SGL_RS04540 and SGL_RS04545 and smr0009 and SGL_RS07325 and SGL_RS04530 and SGL_RS02645 and SGL_RS02635
PSIIc
Photosystem II (PQH2)
SGL_RS11935 and SGL_RS11735 and SGL_RS08205 and SGL_RS08200 and SGL_RS03265 and SGL_RS02070 and SGL_RS09330 and SGL_RS10440 and SGL_RS14825 and SGL_RS16825 and SGL_RS18130 and SGL_RS01910 and SGL_RS11645 and SGL_RS08090 and SGL_RS04525 and SGL_RS12880 and SGL_RS14050 and sml0003 and SGL_RS04440 and SGL_RS07800 and SGL_RS13125 and SGL_RS04535 and SGL_RS04540 and SGL_RS04545 and smr0009 and SGL_RS07325 and SGL_RS04530 and SGL_RS02645 and SGL_RS02635
OECa
Oxygen evolving complex (step 1)
SGL_RS11935 and SGL_RS11735 and SGL_RS08205 and SGL_RS08200 and SGL_RS03265 and SGL_RS02070 and SGL_RS09330 and SGL_RS10440 and SGL_RS14825 and SGL_RS16825 and SGL_RS18130 and SGL_RS01910 and SGL_RS11645 and SGL_RS08090 and SGL_RS04525 and SGL_RS12880 and SGL_RS14050 and sml0003 and SGL_RS04440 and SGL_RS07800 and SGL_RS13125 and SGL_RS04535 and SGL_RS04540 and SGL_RS04545 and smr0009 and SGL_RS07325 and SGL_RS04530 and SGL_RS02645 and SGL_RS02635
OECb
Oxygen evolving complex (step 2)
SGL_RS11935 and SGL_RS11735 and SGL_RS08205 and SGL_RS08200 and SGL_RS03265 and SGL_RS02070 and SGL_RS09330 and SGL_RS10440 and SGL_RS14825 and SGL_RS16825 and SGL_RS18130 and SGL_RS01910 and SGL_RS11645 and SGL_RS08090 and SGL_RS04525 and SGL_RS12880 and SGL_RS14050 and sml0003 and SGL_RS04440 and SGL_RS07800 and SGL_RS13125 and SGL_RS04535 and SGL_RS04540 and SGL_RS04545 and smr0009 and SGL_RS07325 and SGL_RS04530 and SGL_RS02645 and SGL_RS02635
OECc
Oxygen evolving complex (step 3)
SGL_RS11935 and SGL_RS11735 and SGL_RS08205 and SGL_RS08200 and SGL_RS03265 and SGL_RS02070 and SGL_RS09330 and SGL_RS10440 and SGL_RS14825 and SGL_RS16825 and SGL_RS18130 and SGL_RS01910 and SGL_RS11645 and SGL_RS08090 and SGL_RS04525 and SGL_RS12880 and SGL_RS14050 and sml0003 and SGL_RS04440 and SGL_RS07800 and SGL_RS13125 and SGL_RS04535 and SGL_RS04540 and SGL_RS04545 and smr0009 and SGL_RS07325 and SGL_RS04530 and SGL_RS02645 and SGL_RS02635
OECd
Oxygen evolving complex (step 4)
SGL_RS11935 and SGL_RS11735 and SGL_RS08205 and SGL_RS08200 and SGL_RS03265 and SGL_RS02070 and SGL_RS09330 and SGL_RS10440 and SGL_RS14825 and SGL_RS16825 and SGL_RS18130 and SGL_RS01910 and SGL_RS11645 and SGL_RS08090 and SGL_RS04525 and SGL_RS12880 and SGL_RS14050 and sml0003 and SGL_RS04440 and SGL_RS07800 and SGL_RS13125 and SGL_RS04535 and SGL_RS04540 and SGL_RS04545 and smr0009 and SGL_RS07325 and SGL_RS04530 and SGL_RS02645 and SGL_RS02635
OECe
Oxygen evolving complex (step 5)
SGL_RS11935 and SGL_RS11735 and SGL_RS08205 and SGL_RS08200 and SGL_RS03265 and SGL_RS02070 and SGL_RS09330 and SGL_RS10440 and SGL_RS14825 and SGL_RS16825 and SGL_RS18130 and SGL_RS01910 and SGL_RS11645 and SGL_RS08090 and SGL_RS04525 and SGL_RS12880 and SGL_RS14050 and sml0003 and SGL_RS04440 and SGL_RS07800 and SGL_RS13125 and SGL_RS04535 and SGL_RS04540 and SGL_RS04545 and smr0009 and SGL_RS07325 and SGL_RS04530 and SGL_RS02645 and SGL_RS02635

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External database links

Old identifiers

    slr0927

Latest BiGG Models publication:

King ZA, Lu JS, Dräger A, Miller PC, Federowicz S, Lerman JA, Ebrahim A, Palsson BO, and Lewis NE. BiGG Models: A platform for integrating, standardizing, and sharing genome-scale models (2016) Nucleic Acids Research 44(D1):D515-D522. doi:10.1093/nar/gkv1049

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