Gene: SF3922

Descriptive name:

fadB

Model:

iSF_1195

Position:

Left: 4041732 – Right: 4043921

Strand:

Minus

Chromosome:

AE005674.2

DNA Sequence

ATGCTTTACAAAGGCGACACCCTGTACCTTGACTGGCTGGAAGATGGCATTGCCGAACTGGTATTTGATGCCCCAGGTTCAGTTAATAAACTCGACACTGCGACCGTCGCCAGCCTCGGCGAGGCCATCGGCGTGCTGGAACAGCAATCAGATCTAAAAGGGCTGCTGCTGCGTTCGAACAAAGCAGCCTTTATCGTCGGTGCTGATATCACCGAATTTTTGTCCCTGTTCCTCGTTCCTGAAGAACAGTTAAGTCAGTGGCTGCACTTTGCCAATAGCGTGTTTAATCGCCTGGAAGATCTGCCGGTGCCGACCATTGCTGCCGTCAACGGCTATGCGCTGGGTGGTGGCTGCGAATGCGTGCTGGCGACCGATTATCGTCTGGCGACGCCGGATCTGCGCATCGGTCTGCCGGAAACCAAACTGGGCATCATGCCGGGCTTTGGCGGTTCTGTACGTATGCCACGTATGCTGGGCGCTGACAGTGCACTGGAAATCATTGCCGCCGGTAAAGATGTCGGCGCGGATCAGGCGCTGAAAATCGGTCTGGTGGATGGCGTAGTCAAAGCAGAAAAACTGATTGAAGGGGCGATGGCGATTTTACGCCAGGCCATTAACGGCGACCTCGACTGGAAAGCGAAACGTCAGCCGAAGCAGGAACCGCTAAAACTGAGCAAGATTGAAGCCACCATGAGCTTCACCATCGCTAAAGGAATGGTCGCGCAAACGGCGGGGAAACATTATCCGGCCCCCATCACCGCAGTAAAAACCATTGAAGCTGCGGCCCGTTTTGGTCGTGAAGAAGCCTTAAATCTGGAAAACAAAAGTTTTGTCCCGCTGGCGCATACCAACGAAGCTCGCGCACTGGTCGGCATTTTCCTTAACGATCAATATGTAAAAGGCAAAGCGAAGAAACTCACCAAAGACGTTGAAACCCCGAAACAGGCTGCTGTGCTGGGCGCAGGCATCATGGGTGGCGGTATCGCTTACCAGTCCGCGTGGAAAGGCGTGCCGGTTGTCATGAAAGATATCAACGACAAGTCGTTAACCCTCGGCATGACCGAAGCCGCGAAACTGCTGAACAAGCAGCTTGAGCGCGGCAAAATCGATGGTCTGAAACTGGCTGGCGTGATCTCCACGATCCACCCAACGCTCGACTACGCCGGATTTGACCGCGTGGATATTGTGGTAGAAGCGGTTGTTGAAAACCCGAAAGTGAAAAAAGCCGTACTGGCAGAAACCGAACAAAAAGTACGCCAGGATACCGTGCTGGCGTCTAACACTTCAACCATTCCTATCAGCGAACTGGCCAACGCGCTGGAACGCCCGGAAAACTTCTGCGGGATGCACTTCTTTAACCCGGTCCACCGAATGCCGTTGGTAGAAATTATTCGCGGCGAGAAAAGCTCCGACGAAACCATCGCGAAAGTTGTCGCCTGGGCGAGCAAGATGGGCAAGACGCCGATTGTGGTTAACGACTGCCCCGGCTTCTTTGTTAACCGCGTGCTGTTCCCGTATTTCGCCGGTTTCAGCCAGCTGCTGCGCGACGGCGCGGATTTCCGCAAGATCGACAAAGTGATGGAAAAACAGTTTGGCTGGCCGATGGGCCCGGCATATCTGCTGGACGTTGTGGGCATTGATACCGCGCATCACGCTCAGGCTGTCATGGCAGCAGGCTTCCCGCAGCGGATGCAGAAAGATTACCGCGATGCCATCGACGCGCTGTTTGATGCCAACCGCTTTGGTCAGAAGAACGGCCTCGGTTTCTGGCGTTATAAAGAAGACAGCAAAGGTAAGCCGAAGAAAGAAGAAGACGCCGCCGTTGAAGACCTGCTGGCAGAAGTGAGCCAACCGAAGCGCGATTTCAGCGAAGAAGAGATTATCGCCCGCATGATGATCCCGATGGTCAACGAAGTGGTGCGCTGTCTGGAAGAGGGCATTATCGCCACTCCGGCGGAAGCGGATATGGCGCTGGTCTACGGCCTGGGCTTCCCTCCGTTCCACGGCGGCGCGTTCCGCTGGCTGGACACCCTCGGTAGCGCAAAATACCTCGATATGGCACAGCAATATCAGCACCTCGGCCCGCTGTATGAAGTGCCGGAAGGTCTGCGTAATAAAGCGCGTCATAACGAACCGTACTATCCTCCGGTTGAGCCAGCCCGTCCGGTTGGCGACCTGAAAACGGCTTAA

Protein Sequence

MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALKIGLVDGVVKAEKLIEGAMAILRQAINGDLDWKAKRQPKQEPLKLSKIEATMSFTIAKGMVAQTAGKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQYVKGKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGFDRVDIVVEAVVENPKVKKAVLAETEQKVRQDTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSKGKPKKEEDAAVEDLLAEVSQPKRDFSEEEIIARMMIPMVNEVVRCLEEGIIATPAEADMALVYGLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPARPVGDLKTA

Associated reactions:

BiGG ID
Name
Gene reaction rule
CTECOAI6
3-cis-2-trans-enoyl-CoA isomerase
SF3922
CTECOAI7
3-cis-2-trans-enoyl-CoA isomerase
SF3922
CTECOAI8
3-cis-2-trans-enoyl-CoA isomerase
SF3922
ECOAH1
3-hydroxyacyl-CoA dehydratase (3-hydroxybutanoyl-CoA)
SF3922 or SF2419
ECOAH2
3-hydroxyacyl-CoA dehydratase (3-hydroxyhexanoyl-CoA)
SF3922 or SF2419
ECOAH3
3-hydroxyacyl-CoA dehydratase (3-hydroxyoctanoyl-CoA)
SF3922 or SF2419
ECOAH4
3-hydroxyacyl-CoA dehydratase (3-hydroxydecanoyl-CoA)
SF3922 or SF2419
ECOAH5
3-hydroxyacyl-CoA dehydratase (3-hydroxydodecanoyl-CoA)
SF3922 or SF2419
ECOAH6
3-hydroxyacyl-CoA dehydratase (3-hydroxytetradecanoyl-CoA)
SF3922 or SF2419
ECOAH7
3-hydroxyacyl-CoA dehydratase (3-hydroxyhexadecanoyl-CoA)
SF3922 or SF2419
ECOAH8
3-hydroxyacyl-CoA dehydratase (3-hydroxyoctadecanoyl-CoA)
SF3922 or SF2419
HACD1
3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA)
SF3922 or SF2419
HACD2
3-hydroxyacyl-CoA dehydrogenase (3-oxohexanoyl-CoA)
SF3922 or SF2419
HACD3
3-hydroxyacyl-CoA dehydrogenase (3-oxooctanoyl-CoA)
SF3922 or SF2419
HACD4
3-hydroxyacyl-CoA dehydrogenase (3-oxodecanoyl-CoA)
SF3922 or SF2419
HACD5
3-hydroxyacyl-CoA dehydrogenase (3-oxododecanoyl-CoA)
SF3922 or SF2419
HACD6
3-hydroxyacyl-CoA dehydrogenase (3-oxotetradecanoyl-CoA)
SF3922 or SF2419
HACD7
3-hydroxyacyl-CoA dehydrogenase (3-oxohexadecanoyl-CoA)
SF3922 or SF2419
HACD8
3-hydroxyacyl-CoA dehydrogenase (3-oxooctadecanoyl-CoA), peroxisomal
SF3922 or SF2419
HACD3i
3-hydroxyacyl-CoA dehydrogenase (3-oxooctanoyl-CoA)
SF2419 or SF3922
HACD2i
3-hydroxyacyl-CoA dehydrogenase (3-oxohexanoyl-CoA)
SF3922 or SF2419
HACD4i
3-hydroxyacyl-CoA dehydrogenase (3-oxodecanoyl-CoA)
SF3922 or SF2419
CTECOAI7
3-cis-2-trans-enoyl-CoA isomerase
SF3922
HACD5i
3-hydroxyacyl-CoA dehydrogenase (3-oxododecanoyl-CoA)
SF3922 or SF2419
HACD7i
3-hydroxyacyl-CoA dehydrogenase (3-oxohexadecanoyl-CoA)
SF3922 or SF2419
CTECOAI8
3-cis-2-trans-enoyl-CoA isomerase
SF3922
HACD1i
3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA)
SF3922 or SF2419
HACD8i
3-hydroxyacyl-CoA dehydrogenase (3-oxooctadecanoyl-CoA)
SF3922 or SF2419
HACD6i
3-hydroxyacyl-CoA dehydrogenase (3-oxotetradecanoyl-CoA)
SF3922 or SF2419
CTECOAI6
3-cis-2-trans-enoyl-CoA isomerase
SF3922
DHACOAH
2,3-dehydroadipyl-CoA hydratase
SF3922 or SF2419

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External database links

Old identifiers

    SF3922

Latest BiGG Models publication:

King ZA, Lu JS, Dräger A, Miller PC, Federowicz S, Lerman JA, Ebrahim A, Palsson BO, and Lewis NE. BiGG Models: A platform for integrating, standardizing, and sharing genome-scale models (2016) Nucleic Acids Research 44(D1):D515-D522. doi:10.1093/nar/gkv1049

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