Gene: SDY_3380


Descriptive name:

yrbK

Model:

iSDY_1059

Position:

Left: 3134085 – Right: 3134660

Strand:

Plus

Chromosome:

CP000034.1

DNA Sequence

ATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGCGGTTCTGGTGATGATCGGCATTAATATGGCCGAAAAAGACGATACCGCCCAGGTGGTCGTCAACAACAATGATCCCACCTATAAAAGCGAGCATACGGACACGCTCGTCTATAACCCAGAAGGGGCGCTAAGCTATCGATTGATTGCTCAACACGTTGAATATTATTCCGATCAGGCCGTTTCGTGGTTTACGCAGCCGGTACTTACCACGTTTGATAAGGATAAAATCCCGACATGGTCCGTAAAAGCAGATAAAGCCAAGCTGACCAATGACCGGATGCTCTATTTATATGGACACGTTGAAGTCAACGCACTCGTGCCGGACTCTCAACTTCGCAGAATCACGACGGATAACGCGCAGATCAATCTGGTGACGCAGGATGTTACCTCTGAAGACCTCGTCACGTTATATGGAACAACATTTAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTGAAAAGGTTAGAACATCCTATGAAATTCAAAACAAACAAACTCAGCCTTAA

Protein Sequence

MSKARRWVIIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKSEHTDTLVYNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAKLTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSGLKMRGNLRSKNAELIEKVRTSYEIQNKQTQP

Associated reactions:

BiGG ID
Name
Gene reaction rule
ACOLIPAabctex
Arabinose modified core oligosaccharide lipid A transport via ABC system (periplasm to extracellular)
SDY_3381 and SDY_3382 and SDY_3380 and SDY_4285 and SDY_4286
CLIPAabctex
Cold lipid A transport via ABC system (periplasm to extracellular)
SDY_3381 and SDY_3382 and SDY_3380 and SDY_4285 and SDY_4286
COLIPAPabctex
Core oligosaccharide lipid A diphosphate transport via ABC system (periplasm to extracellular)
SDY_3381 and SDY_3382 and SDY_3380 and SDY_4285 and SDY_4286
COLIPAabctex
Core oligosaccharide lipid A transport via ABC system (periplasm to extracellular)
SDY_3381 and SDY_3382 and SDY_3380 and SDY_4285 and SDY_4286
ECA4COLIPAabctex
Enterobacterial common antigen (x4) core oligosaccharide lipid A transport via ABC system (periplasm to extracellular)
SDY_3381 and SDY_3382 and SDY_3380 and SDY_4285 and SDY_4286
ENLIPAabctex
Phosphoethanolamine lipid A transport via ABC system (periplasm to extracellular)
SDY_3381 and SDY_3382 and SDY_3380 and SDY_4285 and SDY_4286
K2L4Aabctex
KDO(2)-lipid IV A transport via ABC system (periplasm to extracellular)
SDY_3381 and SDY_3382 and SDY_3380 and SDY_4285 and SDY_4286
LIPAabctex
Lipid A transport via ABC system (periplasm to extracellular)
SDY_3381 and SDY_3382 and SDY_3380 and SDY_4285 and SDY_4286
O16A4COLIPAabctex
O16 antigen (x4) core oligosaccharide lipid A transport via ABC system (periplasm to extracellular)
SDY_3381 and SDY_3382 and SDY_3380 and SDY_4285 and SDY_4286
ENLIPIDAt1ex
Phosphoethanolamine lipid IVa transport via vector periplasm to extracellular
(SDY_3382 and SDY_4285 and SDY_4286) or (SDY_3382 and SDY_4285 and SDY_4286 and SDY_3380)

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External database links

Old identifiers

    SDY_3380

Latest BiGG Models publication:

King ZA, Lu JS, Dräger A, Miller PC, Federowicz S, Lerman JA, Ebrahim A, Palsson BO, and Lewis NE. BiGG Models: A platform for integrating, standardizing, and sharing genome-scale models (2016) Nucleic Acids Research 44(D1):D515-D522. doi:10.1093/nar/gkv1049


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