Gene: SDY_3363

Descriptive name:

dacB

Model:

iSDY_1059

Position:

Left: 3120368 – Right: 3121801

Strand:

Plus

Chromosome:

CP000034.1

DNA Sequence

ATGCGATTTTCCAGATTTATCATCGGATTGACCAGCTGTATAGCGTTCAGTGTTCAGGCCGCGAATGTTGATGAGTACGTTACTCAACTCCCCGCTGGTGCCAACCTTGCCCTGATGGTGCAAAAAGTCGGCGCGTCGGCCCCCGCTATTGATTACCACAGTCAGCAGATGGCGCTGCCCGCCAGTACCCAGAAAGTGATTACTGCGCTGGCGGCGTTGATTCAACTCGGCCCCGATTTTCGTTTCACCACGACGCTTGAAACCAAAGGCAATGTGGAAAACGGCGTACTTAAGGGTGACTTAGTGGCGCGATTTGGTGCCGATCCGACGTTAAAACGTCAGGATATTCGCAATATGGTCGCGACTTTGAAAAAATCTGGCGTCAACCAAATCGATGGCAATGTGTTGATAGATACCTCCATTTTCGCCAGCCACGATAAAGCCCCCGGCTGGCCATGGAATGACATGACACAATGCTTTAGCGCTCCGCCTGCCGCCGCCATAGTTGACCGCAACTGTTTATCCGTCTCGCTCTACAGTGCCCCAAAACCTGGTGATATGGCTTTTATACGCGTGGCATCTTATTACCCCGTTACGATGTTCAGCCAGGTACGCACCCTCCCCCGTGGTTCTGCCGAAGCGCAATACTGCGAACTGGATGTCGTGCCAGGCGACCTGAACCGCTTTACGCTAACGGGATGCCTGCCGCAACGTTCTGAGCCGCTCCCGTTGGCTTTTGCCGTGCAGGATGGAGCCAGCTATGCCGGGGCAATTCTGAAAGATGAGTTAAAACAGGCAGGTATCACCTGGAGCGGAACACTGCTGCGCCAGACTCAGGTTAACGAACCTGGAACGGTAGTTGCCAGTAAACAGTCGGCCCCGTTGCACGATCTGCTTAAGATTATGCTGAAAAAGTCGGACAACATGATCGCCGATACGGTTTTCCGCATGATAGGCCATGCGCGCTTCAATGTGCCTGGAACATGGCGGGCCGGGTCGGACGCCGTGCGTCAGATCCTGCGCCAGCAAGCCGGTGTCGATATTGGAAATACCATTATTGCCGATGGTTCAGGGCTTTCGCGGCATAACCTGATTGCCCCCGCCACCATGATGCAGGTGCTGCAATACATTGCCCAACACGACAATGAACTTAACTTTATCTCCATGCTGCCGCTGGCGGGCTATGACGGCTCTTTGCAGTACCGTGCAGGTCTGCATCAGGCGGGCGTGGATGGCAAAGTCTCAGCGAAAACCGGTTCGTTGCAGGGGGTATATAACCTGGCGGGATTCATTACCACAGCGAGCGGGCAACGAATGGCGTTTGTACAATATCTTTCTGGCTATGCAGTAGAACCGGCGGATCAGCGTAATCGCCGTATTCCGTTAGTGCGTTTTGAAAGCCGTTTGTATAAAGATATTTATCAGAACAATTAG

Protein Sequence

MRFSRFIIGLTSCIAFSVQAANVDEYVTQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCLSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN

Associated reactions:

BiGG ID
Name
Gene reaction rule
MDDCP1pp
Murein D,D-carboxypeptidase (murein5px4p) (periplasm)
SDY_0554 or SDY_3363 or SDY_0841 or SDY_2233
MDDCP2pp
Murein D,D-carboxypeptidase (murein5px4px4p) (periplasm)
SDY_0554 or SDY_3363 or SDY_0841 or SDY_2233
MDDCP3pp
Murein D,D-carboxypeptidase (murein5p5p) (periplasm)
SDY_0554 or SDY_3363 or SDY_0841 or SDY_2233
MDDCP4pp
Murein D,D-carboxypeptidase (murein5p4p) (periplasm)
SDY_0554 or SDY_3363 or SDY_0841 or SDY_2233
MDDCP5pp
Murein D,D-carboxypeptidase (murein5p3p) (periplasm)
SDY_0554 or SDY_3363 or SDY_0841 or SDY_2233
MDDEP1pp
Murein D,D-endopeptidase (murein4px4p) (periplasm)
SDY_3363 or SDY_2527 or SDY_2154
MDDEP2pp
Murein D,D-endopeptidase (murein3px4p) (periplasm)
SDY_3363 or SDY_2527 or SDY_2154
MDDEP3pp
Murein D,D-endopeptidase (murein5px4p) (periplasm)
SDY_3363 or SDY_2527 or SDY_2154
MDDEP4pp
Murein D,D-endopeptidase (murein4px4px4p) (periplasm)
SDY_3363 or SDY_2527 or SDY_2154

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External database links

Old identifiers

    SDY_3363

Latest BiGG Models publication:

King ZA, Lu JS, Dräger A, Miller PC, Federowicz S, Lerman JA, Ebrahim A, Palsson BO, and Lewis NE. BiGG Models: A platform for integrating, standardizing, and sharing genome-scale models (2016) Nucleic Acids Research 44(D1):D515-D522. doi:10.1093/nar/gkv1049

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