Gene: ndhD

Descriptive name:

ndhD

Model:

iJN678

Position:

Left: 747575 – Right: 749038

Strand:

Plus

Chromosome:

BA000022.2

DNA Sequence

ATGACCCTATTTGCAGTTTCAGCGGAATTTAATGCGGCGCCCTGGGCCACGGTGGTCATTTGCTTGGCTTTGATGGCGGGCTTCACTGGCTATTTATTGCCTGCCACCATTCGTTTTTTGACTTTGGCCGTCTGTTTTGGCACTGGATTTTTAGCCTATTTGGGATTTTCTTTGCCGGAAGCCCAGTCTTGGTATTTGTTAGACAGTTTTGGCGTTGTTTTTCAACTGGATGCCCTATCGGGTTATTTCCTCTTGACCAATGCCCTGGTGACTTTGGCGGTGTTGGTCTATTGCTGGAATACCGGCCGCTCAGCCTTTTTTTATGCCCAACTGATCATTCTCCACGCTAGCCTTAATTCCGCTTTTCTTTGTGCGGATTTTATGAGTCTTTATGTGGCCCTGGAAGTGGTGGCGATCGCCGCTTTTTGCCTGATGACCTATCCTAGGGAACCCCGAATTATTTGGCTGGGACTGCGCTATCTACTGCTGAGCAACACTGCCATGTTGTTTTATTTAATCGGGGTAGCACTGGTTTATAAAACTAATCAATCCTTTGCTTTTAGCGGTTTAACCCAAGCTCCCCCAGAGGCGATCGCCCTGATATTTTTGGGATTGTTGACCAAAGGGGGCATTTTTTTGGCGGGACTGTGGTTGCCCCAAACCCATGGGGAAGCGGCCACACCAGTTTCGGCCATGCTATCAGGGGCAGTGGTTAAAGCAGGAGCTTTGCCCCTATTGCGCTGTGCTTTATTGTCCGATCAACTACTATTATTAGTACAAATTTTGGGGGTAGCCACGGCGTTATTTGGAGTGGTCTATGCCATGCTGGCCAAGGACAGTAAGCGAATGTTAGCATTTCACACCGTTTCCCAAATGGGCTTTGTGTTGGCGGCCCCCATTGCTGGCGGTTTTTATGCTCTCAGCCACGGTTTAGTGAAATCTAGCCTCTTCCTGTTGGCGGGGAATTTGCCCAGTCGGGACTTCAAAGTTCTGAAGAAAACTCCCATTGCCGCTGGTTTTTGGGTTCCCCTGCTTCTGGCCAGTTCTTCCATTGCCGGTTTTCCCCTACTGGCGGGCTTTGAAGCGAAAACCCTGACCCTCAAAGGATTGCCCCCCTGGTTGGCGATCGCCTTAAACATTGCCGCGGTGGGTACAGCCATTTCCTTTTCCAAATTCGTTTTCCTGAAACCAACCTTTGTCGGTAAAACCTATCCCCTGGGCTTAGGCCTAGCGTTGGTGGTGTTACTCGGCGGTTTGGCCGTGGGTAATGTGGTTTACTGGCAAGCCTTTACCCCCAGTAATTTAATCAAAGCTACCCTGACCTGCGTGGTGGGGGCAGGACTATATTGGGTCGTGGTCAAAAGGCTAACCCTAAAACTGCCCGATGAAGGAGAACAGGTTGACCATCTGCTCGGCATGATGAGCATCAGTTTAACCATTCTCTTTGCCTGGATTTTAGTATGA

Protein Sequence

MTLFAVSAEFNAAPWATVVICLALMAGFTGYLLPATIRFLTLAVCFGTGFLAYLGFSLPEAQSWYLLDSFGVVFQLDALSGYFLLTNALVTLAVLVYCWNTGRSAFFYAQLIILHASLNSAFLCADFMSLYVALEVVAIAAFCLMTYPREPRIIWLGLRYLLLSNTAMLFYLIGVALVYKTNQSFAFSGLTQAPPEAIALIFLGLLTKGGIFLAGLWLPQTHGEAATPVSAMLSGAVVKAGALPLLRCALLSDQLLLLVQILGVATALFGVVYAMLAKDSKRMLAFHTVSQMGFVLAAPIAGGFYALSHGLVKSSLFLLAGNLPSRDFKVLKKTPIAAGFWVPLLLASSSIAGFPLLAGFEAKTLTLKGLPPWLAIALNIAAVGTAISFSKFVFLKPTFVGKTYPLGLGLALVVLLGGLAVGNVVYWQAFTPSNLIKATLTCVVGAGLYWVVVKRLTLKLPDEGEQVDHLLGMMSISLTILFAWILV

Associated reactions:

BiGG ID
Name
Gene reaction rule
NDH1_2p
NAD(P)H dehydrogenase (plastoquinone-8 & 3 protons) (periplasm)
(ndhD or ndhD2) and ndhF and ndhA and ndhB and ndhC and ndhE and ndhG and ndhH and ndhI and ndhJ and (ndhK or sll8031) and slr1623 and sll1262 and sll1220 and hoxF and hoxU
NDH1_1u
NAD(P)H dehydrogenase (plastoquinone-8 & 3 protons) (tilacoide)
(ndhD or ndhD2) and ndhF and ndhA and ndhB and ndhC and ndhE and ndhG and ndhH and ndhI and ndhJ and (ndhK or sll8031) and slr1623 and sll1262 and sll1220 and hoxF and hoxU
NDH1_2u
NAD(P)H dehydrogenase (plastoquinone-8 & 3 protons) (tilacoide)
(ndhD or ndhD2) and ndhF and ndhA and ndhB and ndhC and ndhE and ndhG and ndhH and ndhI and ndhJ and (ndhK or sll8031) and slr1623 and sll1262 and sll1220 and hoxF and hoxU
NDH1_1p
NAD(P)H dehydrogenase (plastoquinone-8 & 3 protons) (periplasm)
(ndhD or ndhD2) and ndhF and ndhA and ndhB and ndhC and ndhE and ndhG and ndhH and ndhI and ndhJ and (ndhK or sll8031) and slr1623 and sll1262 and sll1220 and hoxF and hoxU
NDH1_4pp
Active co2 transporter facilitator (periplasm)
ndhA and ndhB and ndhC and ndhE and ndhG and ndhH and ndhI and ndhJ and (ndhK or sll8031) and slr1623 and sll1262 and sll1220 and hoxF and hoxU and ndhD and ndhF and slr1302

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External database links

Old identifiers

    sll0027, slr0331

Latest BiGG Models publication:

King ZA, Lu JS, Dräger A, Miller PC, Federowicz S, Lerman JA, Ebrahim A, Palsson BO, and Lewis NE. BiGG Models: A platform for integrating, standardizing, and sharing genome-scale models (2016) Nucleic Acids Research 44(D1):D515-D522. doi:10.1093/nar/gkv1049

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