Gene: EcSMS35_3478

Descriptive name:

dacB

Model:

iEcSMS35_1347

Position:

Left: 3555720 – Right: 3557153

Strand:

Plus

Chromosome:

CP000970.1

DNA Sequence

ATGCGATTTTCCAGATTTATCATCGGATTGACCAGCTGTATAGCGTTCAGTGTTCAGGCCGCAAATGTTGATGAGTACATTACTCAACTCCCCGCTGGTGCCAACCTTGCCCTGATGGTGCAAAAAGTCGGCGCGTCGGCCCCCGCTATTGATTACCACAGTCAGCAGATGGCGCTGCCCGCCAGTACGCAGAAAGTGATTACTGCGCTGGCGGCGTTGATTCAACTCGGCCCCGATTTTCGTTTTACCACGACGCTTGAAACCAAAGGTAATGTGGAAAACGGTGTACTTAAGGGTGACTTAGTAGCGCGATTTGGTGCCGATCCGACGTTAAAACGTCAGGATATTCGCAATATGGTCGCGACTTTGAAAAAATCTGGCGTCAACCAAATCGATGGCAATGTGTTGATAGATACCTCCATTTTCGCCAGCCACGATAAAGCCCCCGGCTGGCCATGGAATGACATGACACAATGCTTTAGCGCTCCGCCTGCCGCCGCCATAGTTGACCGCAACTGTTTCTCCGTCTCGCTCTATAGTGCCCCAAAACCTGGTGATATGGCTTTTATACGCGTGGCATCTTATTACCCCGTTACGATGTTCAGCCAGGTACGCACCCTCCCCCGTGGTTCTGCCGAAGCGCAATACTGCGAGCTGGATGTGGTGCCAGGCGACCTGAACCGCTTTACGCTGACCGGATGCCTGCCACAACGTTCTGAGCCGCTCCCGTTGGCTTTTGCCGTGCAGGATGGTGCCAGCTATGCCGGGGCAATTCTGAAAGATGAGTTAAAACAGGCGGGTATCACCTGGAGCGGAACACTGCTGCGCCAGACTCAAGTTAACGAACCTGGAACGGTAGTTGCCAGTAAACAGTCGGCCCCGCTGCACGATCTGCTTAAGATTATGCTGAAAAAGTCGGACAACATGATTGCCGATACGGTTTTCCGCATGATCGGCCATGCGCGCTTCAATGTGCCTGGAACATGGCGGGCCGGGTCGGACGCCGTGCGTCAGATCCTGCGCCAGCAAGCCGGTGTCGATATTGGTAACACCATTATTGCCGATGGTTCAGGGCTTTCGCGGCATAACCTGATTGCCCCCGCCACCATGATGCAGGTGCTGCAATACATAGCCCAACACGACAATGAACTTAACTTTATCTCTATGCTGCCGCTGGCGGGCTATGACGGCTCTTTGCAGTACCGTGCAGGTCTGCATCAGGCGGGCGTGGATGGCAAAGTCTCAGCGAAAACCGGCTCGTTGCAGGGGGTATATAACCTGGCGGGATTCATTACCACGGCGAGCGGGCAACGAATGGCGTTTGTACAATATCTTTCTGGCTATGCAGTAGAACCGGCGGATCAGCGTAATCGCCGTATTCCGTTGGTACGTTTTGAAAGCCGTTTGTATAAAGATATTTACCAGAACAATTAG

Protein Sequence

MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN

Associated reactions:

BiGG ID
Name
Gene reaction rule
MDDCP1pp
Murein D,D-carboxypeptidase (murein5px4p) (periplasm)
EcSMS35_0652 or EcSMS35_3478 or EcSMS35_0866 or EcSMS35_1051
MDDCP2pp
Murein D,D-carboxypeptidase (murein5px4px4p) (periplasm)
EcSMS35_0652 or EcSMS35_3478 or EcSMS35_0866 or EcSMS35_1051
MDDCP3pp
Murein D,D-carboxypeptidase (murein5p5p) (periplasm)
EcSMS35_0652 or EcSMS35_3478 or EcSMS35_0866 or EcSMS35_1051
MDDCP4pp
Murein D,D-carboxypeptidase (murein5p4p) (periplasm)
EcSMS35_0652 or EcSMS35_3478 or EcSMS35_0866 or EcSMS35_1051
MDDCP5pp
Murein D,D-carboxypeptidase (murein5p3p) (periplasm)
EcSMS35_0652 or EcSMS35_3478 or EcSMS35_0866 or EcSMS35_1051
MDDEP1pp
Murein D,D-endopeptidase (murein4px4p) (periplasm)
EcSMS35_3478 or EcSMS35_2485 or EcSMS35_0910
MDDEP2pp
Murein D,D-endopeptidase (murein3px4p) (periplasm)
EcSMS35_3478 or EcSMS35_2485 or EcSMS35_0910
MDDEP3pp
Murein D,D-endopeptidase (murein5px4p) (periplasm)
EcSMS35_3478 or EcSMS35_2485 or EcSMS35_0910
MDDEP4pp
Murein D,D-endopeptidase (murein4px4px4p) (periplasm)
EcSMS35_3478 or EcSMS35_2485 or EcSMS35_0910

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External database links

Old identifiers

    EcSMS35_3478

Latest BiGG Models publication:

King ZA, Lu JS, Dräger A, Miller PC, Federowicz S, Lerman JA, Ebrahim A, Palsson BO, and Lewis NE. BiGG Models: A platform for integrating, standardizing, and sharing genome-scale models (2016) Nucleic Acids Research 44(D1):D515-D522. doi:10.1093/nar/gkv1049

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