Gene: APECO1_RS12990

Descriptive name:

Model:

iAPECO1_1312

Position:

Left: 2562241 – Right: 2564385

Strand:

Minus

Chromosome:

NC_008563.1

DNA Sequence

ATGGAAATGGCATCAGCGTTTACTCTTAATGTTCGTCTGGACAACATTGCTATCATCACCATCGACGTACCGGGTGAGAAAATGAATACCCTCAAGGCGGAATTTGCCTCGCAGGTACGCGCCATTATTAAGCAAATCCGTGAAAACAAAGAGTTGCGTGGCGTGGTGTTTGTCTCCGCGAAACCAGACAACTTCATTGCTGGCGCAGACATCAACATGATCGGCAACTGCAAAACGGCGCAAGAAGCGGAAGTACTGGCGCGGCAGGGGCAACAGTTAATGGCGGAGATTCATGCTTTGCCCATTCCGGTTATCGCGGCTATTCATGGCGCTTGCCTGGGCGGCGGGCTGGAGTTGGCGCTGGCGTGCCACGGTCGTGTTTGTACTGACGATCCTAAAACGGTGCTCGGTTTGCCTGAAGTACAACTTGGATTGTTACCCGGTTCAGGCGGTACCCAGCGTTTACCGCGCCTGATAGGTGTCAGCACAGCATTAGAGATGATCCTCACCGGAAAACAACTTCGGGCGAAACAGGCGGTAAAGTTGGGGTTGGTGGATGACGTCGTTCCGCACTCCATATTGCTGGAAGCCGCTGTTGAGCTGGCAAAGCAGGATCGCCCATCTTCACGCCCTCTACCTGTACGCGAGCGTATTCTGGCGGGGCCGTTAGGTCGTGCGCTGCTGTTCAAAATGGTCGGTAAGAAAACAGAACACAAAACGCAAGGTAACTATCCGGCGACAGAACGCATCCTGGAGGTTGTCGAAACGGGATTAGCGCAGGGCACCAGCAGCGGCTATGACGCTGAAGCACGGGCGTTTGGCGAACTGGCGATGACGCCGCAATCGCAGGCGCTGCGCAATATCTTTTTTGCCAGTACGGACGTGAAGAAAGATCCCGGCAGTGATGCGCCGCCTGCGCCATTAAACAGCGTGGGGATTCTAGGTGGTGGCTTGATGGGCGGCGGTATTGCTTATGTCACTGCTTGTAAAGCGGGGCTTCCGGTCAGAATTAAAGATATCAACCCGCGGGGCATAAATCATGCGCTGAAGTACAGTTGGGATCAGCTTGAGGGCAAAGTTCGCCGTCGTCATCTCAAAGCCAGCGAACGTGACAAACAGCTGGCATTAATCTCCGGAACGACGGACTATTGCGGCTTTGCCCATCGCGATCTGATTATTGAAGCGGTGTTTGAAAATCTCGAATTAAAACAACAGATGGTGGCGGAAGTGGAGCAAAATTGCGCTACTCATACCATCTTTGCTTCGAACACGTCATCTTTACCGATTGGCGATATCGCCGCTCACGCCGCGCGACCTGAGCAAGTTATTGGCCTGCATTTCTTCAGTCCGGTGGAAAAAATGCCGCTGGTGGAGATTATTCCTCATGCGAGTACATCGGCGCAAACCATCGCCACCACGGTAAAACTGGCGAAAAAACAGGGCAAAACGCCAATTGTCGTGCGTGACAAAGCCGGGTTTTACGTCAATCGCATCTTAGCGCCTTACATCAATGAAGCTATCCGCATGTTGACCGAAGGCGAGCGTATTGAGCATATCGATGCCGCGCTAGTGAAATTTGGTTTTCCGGTAGGCCCAATCCAACTTTTGGATGAGGTAGGAATCGACACCGGGACTAAAATTATGCCTGTACTGGAAGCCGCTTATGGAGAACGTTTTAGCGCGCCTGCAAATGTTGTTTCTTCAATTTTGAACGACGATCGCAAAGGCAGAAAAAATGGTCGGGGTTTCTATCTTTATGGTCAGAAAGGGCGTAAAAGCAAAAAACAGGTCGATCCCGCCATTTACCCGCTCATTGGCGCACAAGGGCAGGGGCGACTCTCCGCACCGCAGGTTGCTGAACGGTGTGTGATGTTGATGCTGAATGAAGCAGTACGTTGTCTGGACGAGCAGGTTATCCGTAGCGTGCGTGACGGGGATATAGGCGCGGTATTTGGCATTGGTTTTCCGCCATTTCTCGGTGGACCGTTCCGCTATATCGATTCTCTCGGCGCAGGCGAAGTGGTTGCAATAATGCAACGACTGGCCACGCAGTATGGTTCCCGTTTTACCCCTTGCGATCGTTTAGTTGAGATGAGCGAGCGTGGGGAAAGTTTTTGGAAAACAACTGCAACTGACCTGCAATAA

Protein Sequence

MEMASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVDDVVPHSILLEAAVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPGSDAPPAPLNSVGILGGGLMGGGIAYVTACKAGLPVRIKDINPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGERFSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERGESFWKTTATDLQ

Associated reactions:

BiGG ID
Name
Gene reaction rule
ECOAH1
3-hydroxyacyl-CoA dehydratase (3-hydroxybutanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
ECOAH2
3-hydroxyacyl-CoA dehydratase (3-hydroxyhexanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
ECOAH3
3-hydroxyacyl-CoA dehydratase (3-hydroxyoctanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
ECOAH4
3-hydroxyacyl-CoA dehydratase (3-hydroxydecanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
ECOAH5
3-hydroxyacyl-CoA dehydratase (3-hydroxydodecanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
ECOAH6
3-hydroxyacyl-CoA dehydratase (3-hydroxytetradecanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
ECOAH7
3-hydroxyacyl-CoA dehydratase (3-hydroxyhexadecanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
ECOAH8
3-hydroxyacyl-CoA dehydratase (3-hydroxyoctadecanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
HACD1
3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA)
APECO1_RS21985 or APECO1_RS12990
HACD2
3-hydroxyacyl-CoA dehydrogenase (3-oxohexanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
HACD3
3-hydroxyacyl-CoA dehydrogenase (3-oxooctanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
HACD4
3-hydroxyacyl-CoA dehydrogenase (3-oxodecanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
HACD5
3-hydroxyacyl-CoA dehydrogenase (3-oxododecanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
HACD6
3-hydroxyacyl-CoA dehydrogenase (3-oxotetradecanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
HACD7
3-hydroxyacyl-CoA dehydrogenase (3-oxohexadecanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
HACD8
3-hydroxyacyl-CoA dehydrogenase (3-oxooctadecanoyl-CoA), peroxisomal
APECO1_RS21985 or APECO1_RS12990
HACD3i
3-hydroxyacyl-CoA dehydrogenase (3-oxooctanoyl-CoA)
APECO1_RS12990 or APECO1_RS21985
HACD2i
3-hydroxyacyl-CoA dehydrogenase (3-oxohexanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
HACD5i
3-hydroxyacyl-CoA dehydrogenase (3-oxododecanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
HACD4i
3-hydroxyacyl-CoA dehydrogenase (3-oxodecanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
HACD7i
3-hydroxyacyl-CoA dehydrogenase (3-oxohexadecanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
HACD1i
3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA)
APECO1_RS21985 or APECO1_RS12990
HACD8i
3-hydroxyacyl-CoA dehydrogenase (3-oxooctadecanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
HACD6i
3-hydroxyacyl-CoA dehydrogenase (3-oxotetradecanoyl-CoA)
APECO1_RS21985 or APECO1_RS12990
DHACOAH
2,3-dehydroadipyl-CoA hydratase
APECO1_RS21985 or APECO1_RS12990

Report an error on this page ?

External database links

Old identifiers

    APECO1_4225

Latest BiGG Models publication:

King ZA, Lu JS, Dräger A, Miller PC, Federowicz S, Lerman JA, Ebrahim A, Palsson BO, and Lewis NE. BiGG Models: A platform for integrating, standardizing, and sharing genome-scale models (2016) Nucleic Acids Research 44(D1):D515-D522. doi:10.1093/nar/gkv1049

Copyright © 2019 The Regents of the University of California.