Gene: Gmet_3071

Descriptive name:

dmeF

Model:

iAF987

Position:

Left: 3469679 – Right: 3470683

Strand:

Plus

Chromosome:

CP000148.1

DNA Sequence

ATGCACGCCGAAACGCACCTTGACCAGAGCATCACCGGACGCTTCAAGTATGCCATCATCCTGACGACCTTCACCCTGGTGGCCGAGGTCGCGGGTGGGATCTGGACCAACTCCCTGGCCCTCCTGTCGGACGCGGCCCACGTCTTTCTCGACCTCTTCGCCCTGATCCTGTCGCTGGCGGCCATCAAGCTCGCCGGCTACCCCGCCTCCGACACCCGCACCTTCGGCTGGCACCGGACCGAGGTCTTCGCCTCTTTCATCAACGGCGCCACGGTCTTCCTCATGGCCATCGGCATCTTCTACGAGGCCTGGGAGCGGCTGCGCCACCCGGTGGAGGTCAAGAGCCTCCCGATGCTGGTCATCGCCGCGGTGGGCCTCGTCATGAACCTCGTCGCCGCCTCGGCCCTCCACAGCCACTCCCACGACGATCTGAACGTGCGCAGCGCCTTTCTCCACGTCATCGGCGACGCGGCCGCCTCGGTGGGGGTCATCATCGGCGGCGTCATCATGTACTACACCAGCTGGTACCTCCTGGACGCCATCATCTCCGCCGGGATCGGCTGCGTCATCTTCTGGGGGTCGTGGCGGGTGATCCGGGAGTCGTCCCACATCCTCATGGAGGGGGTCCCCCGGGGGATGAGCACCCGGGAAGTGGCCATTGCCATGCAGGAAGTGGAGGGGGTGAACACGGTCCACCACCTGAACATCTGGACCATCTGCTCCCACATCCTGGCCCTGTCGGCCCACGTGGATGTGGAGCCCGAGCACAAGGAGCGGCAGGCGGATGTGCTCAGGCGGCTCGAAGAGCTGCTCTTCGAGCGCTACCACATCTCCCACACCACCCTCCAGGCCGAGTGCACCCGGTGCGCGGAAACACCGCCGATCATAAAGGAGCTACGCCACCGCCCCCGCCACGGCCAGCACCACGACCATCACGGCCACGACCATGGGCACGGCCATGACCACCACGGGCACGACCACGACCACTGCCACCATGACCACTAG

Protein Sequence

MHAETHLDQSITGRFKYAIILTTFTLVAEVAGGIWTNSLALLSDAAHVFLDLFALILSLAAIKLAGYPASDTRTFGWHRTEVFASFINGATVFLMAIGIFYEAWERLRHPVEVKSLPMLVIAAVGLVMNLVAASALHSHSHDDLNVRSAFLHVIGDAAASVGVIIGGVIMYYTSWYLLDAIISAGIGCVIFWGSWRVIRESSHILMEGVPRGMSTREVAIAMQEVEGVNTVHHLNIWTICSHILALSAHVDVEPEHKERQADVLRRLEELLFERYHISHTTLQAECTRCAETPPIIKELRHRPRHGQHHDHHGHDHGHGHDHHGHDHDHCHHDH

Associated reactions:

BiGG ID
Name
Gene reaction rule
CD2t4pp
Cadmium (Cd+2) transport out via proton antiport (periplasm)
((Gmet_3507 and Gmet_3508 and Gmet_3509) and Gmet_3071) or ((Gmet_3507 and Gmet_3508 and Gmet_3509) and Gmet_0858) or ((Gmet_1547 and Gmet_1548 and Gmet_1549) and Gmet_0858) or ((Gmet_1547 and Gmet_1548 and Gmet_1549) and Gmet_3071)
COBALTt4pp
Cobalt transport out via proton antiporter (periplasm)
((Gmet_3507 and Gmet_3508 and Gmet_3509) and Gmet_3071) or ((Gmet_3507 and Gmet_3508 and Gmet_3509) and Gmet_0858) or ((Gmet_1547 and Gmet_1548 and Gmet_1549) and Gmet_0858) or ((Gmet_1547 and Gmet_1548 and Gmet_1549) and Gmet_3071)
FE2t4pp
Iron(II) transport out via antiport (periplasm)
((Gmet_3507 and Gmet_3508 and Gmet_3509) and Gmet_3071) or ((Gmet_3507 and Gmet_3508 and Gmet_3509) and Gmet_0858) or ((Gmet_1547 and Gmet_1548 and Gmet_1549) and Gmet_0858) or ((Gmet_1547 and Gmet_1548 and Gmet_1549) and Gmet_3071)
NI2t4pp
Nickel transport out via antiport (periplasm)
((Gmet_3507 and Gmet_3508 and Gmet_3509) and Gmet_3071) or ((Gmet_3507 and Gmet_3508 and Gmet_3509) and Gmet_0858) or ((Gmet_1547 and Gmet_1548 and Gmet_1549) and Gmet_0858) or ((Gmet_1547 and Gmet_1548 and Gmet_1549) and Gmet_3071)
ZN2t4pp
Zinc transport out via antiport (periplasm)
((Gmet_3507 and Gmet_3508 and Gmet_3509) and Gmet_3071) or ((Gmet_3507 and Gmet_3508 and Gmet_3509) and Gmet_0858) or ((Gmet_1547 and Gmet_1548 and Gmet_1549) and Gmet_0858) or ((Gmet_1547 and Gmet_1548 and Gmet_1549) and Gmet_3071)

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External database links

Old identifiers

    Gmet_3071

Latest BiGG Models publication:

King ZA, Lu JS, Dräger A, Miller PC, Federowicz S, Lerman JA, Ebrahim A, Palsson BO, and Lewis NE. BiGG Models: A platform for integrating, standardizing, and sharing genome-scale models (2016) Nucleic Acids Research 44(D1):D515-D522. doi:10.1093/nar/gkv1049

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