Gene: Gmet_1896

Descriptive name:

lpdA-2

Model:

iAF987

Position:

Left: 2116956 – Right: 2118314

Strand:

Plus

Chromosome:

CP000148.1

DNA Sequence

GTGAAAAGCTTTGATGTGGTCATTATCGGCGGTGGCCCTGGCGGAATCAATGCGGGAATAATGCTCAGCAAGGCGGGCAAAAATGTTGCCCTGATTCAGGAAGAGGCGGTCTCTTTCGGCGGCACCTGCCTGAATAGCGGCTGTATGCCGACAAAGTCGCTGTTAAAGGCCGCGACGGCTTACCGGTACGCCAAACAGGCAGAAAGATATGGTTTGGACCTGCAGGCGGGACCCGTCGATTTAGGGAAACTGTGCGCCGTTACTGAAACAGATCTCAACATGCTGCGTGGGGCGATCAAGGGAATGCTCGCGGAAACCTCGATTACGGCATTCCGTGGGAACGGCTCTTTCGCGTCGGAGCATGAAGTCACGGTCACCATGGCCGGTGGCGAGCAGGAGACGATCTGGGGCGAAACGATCATTATTGCAACGGGTTCGAGCCCCCGGGAACTCCCCTCGGCGCCCTTCGACGGTTTGCACATCCTTTCGAGCGACCAGATGCTGACCAACACCGACCTGCCGAAAAAACTCCTGATCGTCGGTGGAGGTGCGATCGGATGTGAGTTCGCCACCTTGTATAAAACGTTTGGCAGCGAGGTCGTACTCATCGAGGCGATGGAAACCCTTCTGCCGCGCGAAGACCGCGACGCCGGCAAAAAACTGCAGGCAGCCTTTGAAGCTCAAGGGATTACCGTCAGGACCGGCACGTCGATCGACCGGCTCATCGTAGTAGATGAAAAAATCAGGATACAATTTGACAATGGCGACAGCATCGATAGCATCGACAAGGTTCTGGTCGGAATCGGCAGGGCTCCCAACATCGAGGGGCTGAACCTGGAAGCGGCCGGCCTGCGAACTGAGCATGGCGCCGTCAAGGTGAATGAATTAATGCAAACCAATGTGCCGCACATCTACGCCATCGGAGACGTGACCGGTGGGCTGACGCTGGCCCATGCGGCACAAAGGGAGGCGCAACTGCTGGTCCAAAATCTGCTGCATGGGAGCAGCCATGCTCTCAAAGAACTGGCTGTCCCCCGGGTGGCTTTCAGCTATCCGGAGGTGGCAGCAGTGGGGGCATCCCAGGAAGGAAACGGCATCAGGGCCTACACCTTACCCCAGGTTCCCAATGGACGTTCAGTGGTGGACAAGGTTGCCCCGGCCTTCGTGAAGCTTTTTTTGAAGGAGCAAACCTCTGAAATCGCCGGAGCGGTAATCATCGGAGAGGCGGCGACAGAAATCATACACGAGATGGCATTGGCGGTGGAGAACGGCCTTACCCTGCAACAGGTGGGTAATACGGTTCATGTCCACCCGACCCATTCTAAAAACATCCTCTATGCGATACAAAGCTGCGGTTAA

Protein Sequence

MKSFDVVIIGGGPGGINAGIMLSKAGKNVALIQEEAVSFGGTCLNSGCMPTKSLLKAATAYRYAKQAERYGLDLQAGPVDLGKLCAVTETDLNMLRGAIKGMLAETSITAFRGNGSFASEHEVTVTMAGGEQETIWGETIIIATGSSPRELPSAPFDGLHILSSDQMLTNTDLPKKLLIVGGGAIGCEFATLYKTFGSEVVLIEAMETLLPREDRDAGKKLQAAFEAQGITVRTGTSIDRLIVVDEKIRIQFDNGDSIDSIDKVLVGIGRAPNIEGLNLEAAGLRTEHGAVKVNELMQTNVPHIYAIGDVTGGLTLAHAAQREAQLLVQNLLHGSSHALKELAVPRVAFSYPEVAAVGASQEGNGIRAYTLPQVPNGRSVVDKVAPAFVKLFLKEQTSEIAGAVIIGEAATEIIHEMALAVENGLTLQQVGNTVHVHPTHSKNILYAIQSCG

Associated reactions:

BiGG ID
Name
Gene reaction rule
AKGDH
2-Oxogluterate dehydrogenase
(Gmet_1896 and Gmet_2769 and Gmet_2766) or (Gmet_2764 and Gmet_2769 and Gmet_2766)
GCCc
Glycine-cleavage complex
Gmet_1896 or Gmet_2764
LPD5
Dihydrolipoamide dehydrogenase
(Gmet_0985 and Gmet_2764) or (Gmet_0985 and Gmet_1896)
OBDHc
2-Oxobutanoate dehydrogenase, cytosolic
(Gmet_2509 and Gmet_2510 and Gmet_2511 and Gmet_2764) or (Gmet_2509 and Gmet_2510 and Gmet_2511 and Gmet_1896)
OIVD1r
2-oxoisovalerate dehydrogenase (acylating; 4-methyl-2-oxopentaoate)
(Gmet_2509 and Gmet_2510 and Gmet_2511 and Gmet_2764) or (Gmet_2509 and Gmet_2510 and Gmet_2511 and Gmet_1896)
OIVD2
2-oxoisovalerate dehydrogenase (acylating; 3-methyl-2-oxobutanoate)
(Gmet_2509 and Gmet_2510 and Gmet_2511 and Gmet_2764) or (Gmet_2509 and Gmet_2510 and Gmet_2511 and Gmet_1896)
OIVD3
2-oxoisovalerate dehydrogenase (acylating; 3-methyl-2-oxopentanoate)
(Gmet_2509 and Gmet_2510 and Gmet_2511 and Gmet_2764) or (Gmet_2509 and Gmet_2510 and Gmet_2511 and Gmet_1896)
PDH
Pyruvate dehydrogenase
(Gmet_1896 and (Gmet_2753 and Gmet_2760) and Gmet_2752) or (Gmet_2764 and (Gmet_2753 and Gmet_2760) and Gmet_2752)

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External database links

Old identifiers

    Gmet_1896

Latest BiGG Models publication:

King ZA, Lu JS, Dräger A, Miller PC, Federowicz S, Lerman JA, Ebrahim A, Palsson BO, and Lewis NE. BiGG Models: A platform for integrating, standardizing, and sharing genome-scale models (2016) Nucleic Acids Research 44(D1):D515-D522. doi:10.1093/nar/gkv1049

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