Gene: STM3983

Descriptive name:

fadB

Model:

STM_v1_0

Position:

Left: 4189310 – Right: 4191499

Strand:

Minus

Chromosome:

AE006468.1

DNA Sequence

ATGCTTTATAAAGGCGACACCCTGTACCTCGACTGGCTGGAAGATGGCATCGCCGAACTGGTGTTCGATGCTCCAGGCTCGGTCAATAAACTCGACACCGCAACCGTCGCCAGCCTCGGCCAGGCGCTTGAGGTGCTGGAAAAGCAACACGATTTAAAAGGGCTGCTGCTGCGCTCTAATAAAGCGGCCTTTATTGTCGGCGCGGACATCACCGAATTTCTTTCACTGTTCCTCGTCCCCGAAGAGCAGTTAAGCCAATGGCTGCATTTCGCTAATAGCGTCTTTAACCGTCTGGAAGATTTACCCGTACCGACCCTTGCCGCCGTAAACGGCTATGCGCTGGGCGGCGGGTGCGAATGCGTGCTGGCCACCGATTACCGTCTGGCGACGCCAGACCTCCGTATCGGTCTGCCGGAAACTAAACTGGGCATCATGCCGGGTTTCGGCGGCTCCGTTCGTCTGCCGCGTATGCTGGGCGCAGACAGCGCGCTGGAGATTATCGCGGCAGGTAAAGATGTCGGTGCTGAGCACGCGCTGAAAATCGGCCTTGTGGACGGCGTGGTCAAACAAGAGAAGCTAATTGAAGGCGCGATAGCGGTGTTACGCCAGGCCATTACCGGCGATCTCGACTGGAGAGCTAAACGCCAGCCGAAACTGGAACCGTTGAAACTCAGTAAGATTGAAGCAGCGATGAGCTTTACCATCGCTAAAGGCATGGTCGCACAAACGGCGGGTAAACATTATCCGGCGCCGATGACCGCAGTGAAAACCATTGAAGCCGCCGCGCGTTTTGGTCGTGAAGAAGCGCTGAATCTGGAAAATAAAAGCTTTGTTCCGCTGGCGCATACCAATGAGGCTCGTGCGCTGGTCGGTATCTTCCTCAACGATCAATATGTAAAAGGTAAAGCCAAAAAGCTGACCAAAGATATTGAGACGCCGAAACAGGCAGCCGTACTGGGCGCGGGCATTATGGGCGGCGGTATCGCTTACCAGTCGGCCTGGAAAGGCGTACCGGTCATCATGAAAGATATCAACGATAAATCGTTGAACCTCGGCATGACCGAAGCGGCCAAGCTGCTGAACAAACAGCTGGAGCGCGGCAAGATCGACGGTCTGAAGCTGGCGGGCGTCATTTCGACCATCCACCCGACTCTCGATTATGCCGGTTTCGATCGCGTAGATGTTGTTGTCGAAGCGGTAGTCGAAAATCCGAAAGTCAAAAAAGCGGTACTGGCGGAAACCGAGCAGAAAGTGCGCCCGGAAACCGTGCTGGCCTCAAATACCTCCACCATCCCAATTGGCGAACTGGCAAGCGCCCTGGAACGTCCGGAAAACTTTTGCGGAATGCACTTCTTCAACCCGGTACACCGGATGCCGCTGGTTGAAATCATTCGCGGCGAGAAGAGTTCAGACGAAACCATTGCCAAAGTCGTCGCCTGGGCCAGCAAAATGGGCAAGACACCGATTGTAGTCAACGACTGCCCCGGCTTCTTTGTTAACCGCGTGCTGTTCCCCTATTTCGCCGGTTTCAGTCAACTGCTGCGCGACGGCGCGGATTTCCGCAAAGTCGATAAAGTGATGGAAAAACAGTTCGGCTGGCCGATGGGCCCGGCCTATCTGCTCGACGTGGTGGGTATTGATACCGCCCACCACGCGCAGGCAGTAATGGCGGCAGGCTTCCCACAGCGTATGCAGAAAGATTACCGCGACGCGATCGACGCATTGTTTGACGCCAGCCGTTTTGGGCAAAAAAACGGTCTGGGCTTCTGGCGCTATAAAGAAGACAGCAAGGGTAAGCCGAAGAAAGAAGAAGATGCCGCGGTGGATGACCTGCTGGCAAGCGTCAGCCAGCCGAAACGCGACTTCAGCGACGACGAGATAATCGCCCGTATGATGATCCCGATGATTAACGAAGTGGTTCGCTGTCTGGAAGAAGGCATTATCGCAAGCCCGGCGGAAGCCGATATGGCGCTGGTCTACGGCCTGGGCTTCCCTCCGTTCCACGGCGGCGCATTCCGCTGGCTGGATACACAGGGCAGCGCGAAATATCTTGATATGGCGCAGCAGTATCAACACCTCGGCCCGCTGTATGAGGTGCCGGAAGGGCTGCGTAATAAAGCGCGCCATAACGAACCGTATTATCCCCCGGTTGAACCAGCCCGTCCGGTTGGTTCTCTGAAAACGGCTTAA

Protein Sequence

MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRMLGADSALEIIAAGKDVGAEHALKIGLVDGVVKQEKLIEGAIAVLRQAITGDLDWRAKRQPKLEPLKLSKIEAAMSFTIAKGMVAQTAGKHYPAPMTAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQYVKGKAKKLTKDIETPKQAAVLGAGIMGGGIAYQSAWKGVPVIMKDINDKSLNLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGFDRVDVVVEAVVENPKVKKAVLAETEQKVRPETVLASNTSTIPIGELASALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDASRFGQKNGLGFWRYKEDSKGKPKKEEDAAVDDLLASVSQPKRDFSDDEIIARMMIPMINEVVRCLEEGIIASPAEADMALVYGLGFPPFHGGAFRWLDTQGSAKYLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPARPVGSLKTA

Associated reactions:

BiGG ID
Name
Gene reaction rule
ECOAH1
3-hydroxyacyl-CoA dehydratase (3-hydroxybutanoyl-CoA)
STM3983 or STM2388
ECOAH2
3-hydroxyacyl-CoA dehydratase (3-hydroxyhexanoyl-CoA)
STM3983 or STM2388
ECOAH3
3-hydroxyacyl-CoA dehydratase (3-hydroxyoctanoyl-CoA)
STM2388 or STM3983
ECOAH4
3-hydroxyacyl-CoA dehydratase (3-hydroxydecanoyl-CoA)
STM3983 or STM2388
ECOAH5
3-hydroxyacyl-CoA dehydratase (3-hydroxydodecanoyl-CoA)
STM3983 or STM2388
ECOAH6
3-hydroxyacyl-CoA dehydratase (3-hydroxytetradecanoyl-CoA)
STM3983 or STM2388
ECOAH7
3-hydroxyacyl-CoA dehydratase (3-hydroxyhexadecanoyl-CoA)
STM3983 or STM2388
ECOAH8
3-hydroxyacyl-CoA dehydratase (3-hydroxyoctadecanoyl-CoA)
STM3983 or STM2388
HACD1i
3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA)
STM3983 or STM2388
HACD2i
3-hydroxyacyl-CoA dehydrogenase (3-oxohexanoyl-CoA)
STM3983 or STM2388
HACD3i
3-hydroxyacyl-CoA dehydrogenase (3-oxooctanoyl-CoA)
STM2388 or STM3983
HACD4i
3-hydroxyacyl-CoA dehydrogenase (3-oxodecanoyl-CoA)
STM3983 or STM2388
HACD5i
3-hydroxyacyl-CoA dehydrogenase (3-oxododecanoyl-CoA)
STM3983 or STM2388
HACD6i
3-hydroxyacyl-CoA dehydrogenase (3-oxotetradecanoyl-CoA)
STM3983 or STM2388
HACD7i
3-hydroxyacyl-CoA dehydrogenase (3-oxohexadecanoyl-CoA)
STM3983 or STM2388
HACD8i
3-hydroxyacyl-CoA dehydrogenase (3-oxooctadecanoyl-CoA)
STM3983 or STM2388
CTECOAI7
3-cis-2-trans-enoyl-CoA isomerase
STM3983
CTECOAI8
3-cis-2-trans-enoyl-CoA isomerase
STM3983
CTECOAI6
3-cis-2-trans-enoyl-CoA isomerase
STM3983

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External database links

Old identifiers

    STM3983

Latest BiGG Models publication:

King ZA, Lu JS, Dräger A, Miller PC, Federowicz S, Lerman JA, Ebrahim A, Palsson BO, and Lewis NE. BiGG Models: A platform for integrating, standardizing, and sharing genome-scale models (2016) Nucleic Acids Research 44(D1):D515-D522. doi:10.1093/nar/gkv1049

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